RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 WIPF3A6NGB9 483 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 C3orf70A6NLC5 250 aaPredicted RBP6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 CLDN24A6NM45 220 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 SLC1A7O00341 560 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 EEF2KO00418 725 aaKnown RBP6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 ST8SIA5O15466 376 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 GMDSO60547 372 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 PLGP00747 810 aaPredicted RBP6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 SERPINA3P01011 423 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 LDLRP01130 860 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 THRBP10828 461 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 ADRA2CP18825 462 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 GMPRP36959 345 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 PRELPP51888 382 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF134P52741 427 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 DYNLT1P63172 113 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 LTB4RQ15722 352 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 MEP1AQ16819 746 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 CTU2Q2VPK5 515 aaKnown RBP6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF750Q32MQ0 723 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 LAIR2Q6ISS4 152 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 CES5AQ6NT32 575 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 RANBP10Q6VN20 620 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF782Q6ZMW2 699 aaPredicted RBP6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 USP50Q70EL3 339 aaPredicted RBP6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 CYS1Q717R9 158 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 C16orf62Q7Z3J2 963 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 COMMD7Q86VX2 200 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF595Q8IYB9 648 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 YIPF7Q8N8F6 280 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 PAPD5Q8NDF8 572 aaKnown RBP6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 YIPF5Q969M3 257 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 FOPNLQ96NB1 174 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 SDHCQ99643 169 aaPredicted RBP6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 C11orf70Q9BRQ4 267 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 CCDC90BQ9GZT6 254 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 SPNS1Q9H2V7 528 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 CYP3A43Q9HB55 503 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 TRPC4Q9UBN4 977 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 RAPGEFL1Q9UHV5 662 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 TINAGQ9UJW2 476 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 ELF5Q9UKW6 265 aaPredicted RBP6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 COPS3Q9UNS2 423 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 WASF3Q9UPY6 502 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 MFHAS1Q9Y4C4 1052 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 HSPB11Q9Y547 144 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 NPIPB13A6NJU9 1138 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 SLC9B1P1A6NJY1 282 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 OR6C65A6NJZ3 312 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 NPIPB4C9JG80 1138 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 G3V2L1 256 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 HRKO00198 91 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 MRASO14807 208 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 DCLK1O15075 740 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 LANCL1O43813 399 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 CST8O60676 142 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 SNAPINO95295 136 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 CXCL14O95715 111 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 ECDO95905 644 aaPredicted RBP6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 APOC1P02654 83 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 CHRNGP07510 517 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 ANXA8P13928 327 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 TGFBR1P36897 503 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 CTXN1P60606 82 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 FLI1Q01543 452 aaPredicted RBP6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 CSTF3Q12996 717 aaKnown RBP6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 PRKAA1Q13131 559 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 GPM6BQ13491 265 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 GRM7Q14831 915 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 XKR9Q5GH70 373 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 ANXA8L1Q5VT79 327 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 RAET1GQ6H3X3 334 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF573Q86YE8 665 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 P3H2Q8IVL5 708 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 PELI3Q8N2H9 469 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 AMER2Q8N7J2 671 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 FAM110DQ8TAY7 271 aaPredicted RBP6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 TEX47Q8TBZ9 253 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 SEMA4DQ92854 862 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 FAM46BQ96A09 425 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 MXRA8Q9BRK3 442 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 PRRG3Q9BZD7 231 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 XPNPEP3Q9NQH7 507 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 TMLHEQ9NVH6 421 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 BFARQ9NZS9 450 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 TRAPPC4Q9Y296 219 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 PLEKHM1Q9Y4G2 1056 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 PEX16Q9Y5Y5 336 aa6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 GOLGB1Q14789 3259 aaKnown RBP6.41□□□□□ -1.38
TSPAN3-209ENST00000560715 MYH9P35579 1960 aaKnown RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 C2orf92A0A1B0GVN3 265 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 HACD1B0YJ81 288 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 BTN3A3O00478 584 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 TIAF1O95411 115 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 CALCAP01258 141 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 FGBP02675 491 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 HLA-DMAP28067 261 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 PTPN6P29350 595 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 GLRBP48167 497 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 DGKQP52824 942 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms