RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 PGRMC2O15173 223 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 LRRTM2O43300 516 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 UGDHO60701 494 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 SLC25A12O75746 678 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 OR2J2O76002 312 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 ZFAND5O76080 213 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 UNC5CO95185 931 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 SLU7O95391 586 aaKnown RBP11.17□□□□□ -0.62
TPM1-216ENST00000558910 AIFM1O95831 613 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 OTCP00480 354 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 NR2F6P10588 404 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 MYL2P10916 166 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 CHN1P15882 459 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 ATP5F1P24539 256 aaPredicted RBP11.17□□□□□ -0.62
TPM1-216ENST00000558910 ALDH9A1P49189 494 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 CYB561P49447 251 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 HTR6P50406 440 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 HERVK_113P63132 956 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 ZNF267Q14586 743 aaPredicted RBP11.17□□□□□ -0.62
TPM1-216ENST00000558910 ELAVL1Q15717 326 aaKnown RBP11.17□□□□□ -0.62
TPM1-216ENST00000558910 FJX1Q86VR8 437 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 CPSF7Q8N684 471 aaKnown RBP11.17□□□□□ -0.62
TPM1-216ENST00000558910 METTL6Q8TCB7 284 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 MZB1Q8WU39 189 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 TMEM125Q96AQ2 219 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 GAL3ST4Q96RP7 486 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 NTMT1Q9BV86 223 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 ERVK-6Q9BXR3 956 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 PHF11Q9UIL8 331 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 ERRFI1Q9UJM3 462 aaPredicted RBP11.17□□□□□ -0.62
TPM1-216ENST00000558910 EMCNQ9ULC0 261 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 NPIPA1Q9UND3 350 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 A0A0A6YYD5 115 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 TRGV8A0A0C4DH27 118 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 MANBAO00462 879 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 PROM1O43490 865 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 GLRA3O75311 464 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 SPAG7O75391 227 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 CRCPO75575 148 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 ERAL1O75616 437 aaKnown RBP11.16□□□□□ -0.62
TPM1-216ENST00000558910 NEURL1O76050 574 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 ESRRBO95718 433 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 THBS1P07996 1170 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 SP1P08047 785 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 COX7A2P14406 83 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 KRT4P19013 534 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 SERPINB3P29508 390 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 SSR4P51571 173 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 ERVK-8P63133 956 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 HSF1Q00613 529 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 HMGCS1Q01581 520 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 ALDH6A1Q02252 535 aaKnown RBP11.16□□□□□ -0.62
TPM1-216ENST00000558910 PCDH1Q08174 1060 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 SERTAD2Q14140 314 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 CFAP157Q5JU67 520 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 HSDL2Q6YN16 418 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 GPRIN3Q6ZVF9 776 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 MDGA2Q7Z553 956 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 CYP4Z2PQ8N1L4 340 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 SVOPQ8N4V2 548 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 C1orf52Q8N6N3 182 aaKnown RBP11.16□□□□□ -0.62
TPM1-216ENST00000558910 ST6GALNAC3Q8NDV1 305 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 MDS2Q8NDY4 140 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 OR14A16Q8NHC5 309 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 ASB15Q8WXK1 588 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 DAZLQ92904 295 aaKnown RBP11.16□□□□□ -0.62
TPM1-216ENST00000558910 RBM18Q96H35 190 aaKnown RBP11.16□□□□□ -0.62
TPM1-216ENST00000558910 ZNF717Q9BY31 904 aaPredicted RBP11.16□□□□□ -0.62
TPM1-216ENST00000558910 RNF32Q9H0A6 362 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 WDR41Q9HAD4 459 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 MID1IP1Q9NPA3 183 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 PFDN4Q9NQP4 134 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 LYARQ9NX58 379 aaKnown RBP11.16□□□□□ -0.62
TPM1-216ENST00000558910 COPS7AQ9UBW8 275 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 SEC14L3Q9UDX4 400 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 VTI1BQ9UEU0 232 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 DCDC2Q9UHG0 476 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 ZNF225Q9UK10 706 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 SNX6Q9UNH7 406 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 ERVK-19Q9WJR5 959 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 ASB4Q9Y574 426 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 PTPN13Q12923 2485 aa11.16□□□□□ -0.62
TPM1-216ENST00000558910 A8MVJ9 347 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 TMEM229AB2RXF0 380 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 FOXE1O00358 373 aaPredicted RBP11.15□□□□□ -0.62
TPM1-216ENST00000558910 CDC40O60508 579 aaKnown RBP eCLIP11.15□□□□□ -0.62
TPM1-216ENST00000558910 PDE9AO76083 593 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 OR6B1O95007 311 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 LRATO95237 230 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 DDAH2O95865 285 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 CRYABP02511 175 aaKnown RBP11.15□□□□□ -0.62
TPM1-216ENST00000558910 EDN3P14138 238 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 ALOX15P16050 662 aaPredicted RBP11.15□□□□□ -0.62
TPM1-216ENST00000558910 IMPDH1P20839 514 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 COL8A1P27658 744 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 SOX3P41225 446 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 STT3AP46977 705 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 MEOX1P50221 254 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 HLCSP50747 726 aa11.15□□□□□ -0.62
TPM1-216ENST00000558910 MAPK12P53778 367 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms