RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ERVK-19Q9WJR5 959 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 A0A087X1B8 175 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 PPP6CO00743 305 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 PGRMC2O15173 223 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 PROM1O43490 865 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 TOXO94900 526 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 KLHL2O95198 593 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 AIFM1O95831 613 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 IGHG3P01860 377 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 SBK3P0C264 359 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 CT62P0C5K7 136 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 GFAPP14136 432 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 CNR1P21554 472 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 SOX18P35713 384 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 MAGEA12P43365 314 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 ALDH18A1P54886 795 aaKnown RBP12.5□□□□□ -0.41
VPS18-203ENST00000558855 TGM3Q08188 693 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 GTF2H2Q13888 395 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 PCBP2Q15366 365 aaKnown RBP eCLIP12.5□□□□□ -0.41
VPS18-203ENST00000558855 CPSF6Q16630 551 aaKnown RBP eCLIP12.5□□□□□ -0.41
VPS18-203ENST00000558855 PRAMEF20Q5VT98 475 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 GTF2H2CQ6P1K8 395 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 MEX3BQ6ZN04 569 aaKnown RBP12.5□□□□□ -0.41
VPS18-203ENST00000558855 GPR180Q86V85 440 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 GPALPP1Q8IXQ4 340 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 MMP21Q8N119 569 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 ZCCHC7Q8N3Z6 543 aaKnown RBP12.5□□□□□ -0.41
VPS18-203ENST00000558855 PTGR2Q8N8N7 351 aaPredicted RBP12.5□□□□□ -0.41
VPS18-203ENST00000558855 NOA1Q8NC60 698 aaKnown RBP12.5□□□□□ -0.41
VPS18-203ENST00000558855 OR8K3Q8NH51 312 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 RHEBL1Q8TAI7 183 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 RGMAQ96B86 450 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 DGAT2Q96PD7 388 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 FAM173AQ9BQD7 235 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 ROGDIQ9GZN7 287 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 CDC42EP4Q9H3Q1 356 aaKnown RBP12.5□□□□□ -0.41
VPS18-203ENST00000558855 ACSS3Q9H6R3 686 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 TSC22D4Q9Y3Q8 395 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 ANKRD17O75179 2603 aaKnown RBP12.5□□□□□ -0.41
VPS18-203ENST00000558855 HIVEP1P15822 2718 aa12.5□□□□□ -0.41
VPS18-203ENST00000558855 ATP6AP2A0A1C7CYW4 349 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 H0YIV9 168 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 ATP6AP2O75787 350 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 ALOX15P16050 662 aaPredicted RBP12.49□□□□□ -0.41
VPS18-203ENST00000558855 ELAVL4P26378 380 aaKnown RBP12.49□□□□□ -0.41
VPS18-203ENST00000558855 SSTR4P31391 388 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 HPDP32754 393 aaPredicted RBP12.49□□□□□ -0.41
VPS18-203ENST00000558855 ADH7P40394 386 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 PIK3CBP42338 1070 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 RAP1GDS1P52306 607 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 SLC37A1P57057 533 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 PMPCAQ10713 525 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 TRAF3Q13114 568 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 EBPQ15125 230 aaKnown RBP12.49□□□□□ -0.41
VPS18-203ENST00000558855 GXYLT1Q4G148 440 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 BICRALQ6AI39 1079 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 C8orf74Q6P047 294 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 ARHGAP11AQ6P4F7 1023 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 FAM47EQ6ZV65 393 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 CHSY3Q70JA7 882 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 TRILQ7L0X0 811 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 LIX1LQ8IVB5 337 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 ZNF441Q8N8Z8 693 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 L3MBTL4Q8NA19 623 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 GOLM1Q8NBJ4 401 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 SIMC1Q8NDZ2 872 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 SRFBP1Q8NEF9 429 aaKnown RBP12.49□□□□□ -0.41
VPS18-203ENST00000558855 OR10G3Q8NGC4 313 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 UHMK1Q8TAS1 419 aaKnown RBP12.49□□□□□ -0.41
VPS18-203ENST00000558855 UBE2E3Q969T4 207 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 FBXL20Q96IG2 436 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 SMC6Q96SB8 1091 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 VPS11Q9H270 941 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 SLC6A15Q9H2J7 730 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 TP63Q9H3D4 680 aaPredicted RBP12.49□□□□□ -0.41
VPS18-203ENST00000558855 IPPKQ9H8X2 491 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 ACTR8Q9H981 624 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 IL1RL2Q9HB29 575 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 FARSBQ9NSD9 589 aaKnown RBP12.49□□□□□ -0.41
VPS18-203ENST00000558855 PCTPQ9UKL6 214 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 CHCHD2Q9Y6H1 151 aaPredicted RBP12.49□□□□□ -0.41
VPS18-203ENST00000558855 F8P00451 2351 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 MED12Q93074 2177 aa12.49□□□□□ -0.41
VPS18-203ENST00000558855 FAM58BPP0C7Q3 252 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 TSPAN8P19075 237 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 SERPINB1P30740 379 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 SERPINB8P50452 374 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 WNT3P56703 355 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 DUSP2Q05923 314 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 DUSP8Q13202 625 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 RCN2Q14257 317 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 ZNF267Q14586 743 aaPredicted RBP12.48□□□□□ -0.41
VPS18-203ENST00000558855 ACAP2Q15057 778 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 MPEG1Q2M385 716 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 HYAL4Q2M3T9 481 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 SPRED3Q2MJR0 410 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 LIPJQ5W064 366 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 DESI1Q6ICB0 168 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 OPN5Q6U736 354 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 GK5Q6ZS86 529 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms