RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CCDC120Q96HB5 630 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 MAGED4Q96JG8 741 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 GAL3ST4Q96RP7 486 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 RASL10BQ96S79 203 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 SERPINI1Q99574 410 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 NTMT1Q9BV86 223 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 TXLNGYQ9BZA5 131 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 C12orf65Q9H3J6 166 aaKnown RBP11.61□□□□□ -0.55
SMAD3-208ENST00000558827 ELOVL6Q9H5J4 265 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 DDX31Q9H8H2 851 aaKnown RBP11.61□□□□□ -0.55
SMAD3-208ENST00000558827 ZNF225Q9UK10 706 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 KLF13Q9Y2Y9 288 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-208ENST00000558827 PCDHGB6Q9Y5F9 930 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 NINQ8N4C6 2090 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 DNAJC13O75165 2243 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 CCDC189A1A4V9 331 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 FOXE1O00358 373 aaPredicted RBP11.6□□□□□ -0.55
SMAD3-208ENST00000558827 TFECO14948 347 aaPredicted RBP11.6□□□□□ -0.55
SMAD3-208ENST00000558827 GPR75O95800 540 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 ESRRAP11474 423 aaPredicted RBP11.6□□□□□ -0.55
SMAD3-208ENST00000558827 COX7A2P14406 83 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 ABOP16442 354 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 GRNP28799 593 aaKnown RBP11.6□□□□□ -0.55
SMAD3-208ENST00000558827 HSD17B3P37058 310 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 DCTP40126 519 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 BUD31P41223 144 aaPredicted RBP11.6□□□□□ -0.55
SMAD3-208ENST00000558827 CA7P43166 264 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 PLGLB1Q02325 96 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 CLCQ05315 142 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 CUL3Q13618 768 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 CCNYL2Q5T2Q4 361 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 FAM180BQ6P0A1 224 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 TIFABQ6ZNK6 161 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 FGD2Q7Z6J4 655 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 NUDT13Q86X67 352 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 SPPL2CQ8IUH8 684 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 OR52N2Q8NGI0 321 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 OR5M3Q8NGP4 307 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 TANKQ92844 425 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 RELTQ969Z4 430 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 TMEM237Q96Q45 408 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 TRIM45Q9H8W5 580 aaPredicted RBP11.6□□□□□ -0.55
SMAD3-208ENST00000558827 TIMMDC1Q9NPL8 285 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 LYARQ9NX58 379 aaKnown RBP11.6□□□□□ -0.55
SMAD3-208ENST00000558827 COPS7AQ9UBW8 275 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 TMCO1Q9UM00 188 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 TSC22D4Q9Y3Q8 395 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 CRYBG3Q68DQ2 2970 aa11.6□□□□□ -0.55
SMAD3-208ENST00000558827 ITPR2Q14571 2701 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 TEX15Q9BXT5 2789 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 IQANK1A0A1B0GTG1 560 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 A0A1B0GTH9 108 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 PRSS44E7EML9 344 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 KLRC4-KLRK1H3BQV0 150 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 SNRPB2P08579 225 aaKnown RBP11.59□□□□□ -0.55
SMAD3-208ENST00000558827 TAC1P20366 129 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 SSTR4P31391 388 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 DNASE1L1P49184 302 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 HTR6P50406 440 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 CASP6P55212 293 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 IGLV3-21P80748 117 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-208ENST00000558827 PLIN5Q00G26 463 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 BTKQ06187 659 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 KRTCAP3Q53RY4 240 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 ZNF678Q5SXM1 525 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 MRGPRGQ86SM5 289 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 C9orf40Q8IXQ3 194 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 ARMC10Q8N2F6 343 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 CCNYL1Q8N7R7 359 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 PSD4Q8NDX1 1056 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 ITLN2Q8WWU7 325 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-208ENST00000558827 RIT1Q92963 219 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 WDR41Q9HAD4 459 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 MS4A12Q9NXJ0 267 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 PSMC3IPQ9P2W1 217 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-208ENST00000558827 SUCOQ9UBS9 1254 aaKnown RBP11.59□□□□□ -0.55
SMAD3-208ENST00000558827 TIMM22Q9Y584 194 aa11.59□□□□□ -0.55
SMAD3-208ENST00000558827 CELSR2Q9HCU4 2923 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 MANBAO00462 879 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 ERAL1O75616 437 aaKnown RBP11.58□□□□□ -0.56
SMAD3-208ENST00000558827 OTCP00480 354 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 TPOP07202 933 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 CT62P0C5K7 136 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 CCL3P10147 92 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 NT5EP21589 574 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 PIK3R1P27986 724 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 PIGAP37287 484 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 FEN1P39748 380 aaKnown RBP11.58□□□□□ -0.56
SMAD3-208ENST00000558827 ALDH9A1P49189 494 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 XKP51811 444 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 PPIAP62937 165 aaKnown RBP11.58□□□□□ -0.56
SMAD3-208ENST00000558827 ADORA2A-AS1P86434 159 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 PRAMEF20Q5VT98 475 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 SP5Q6BEB4 398 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-208ENST00000558827 METTL2BQ6P1Q9 378 aaKnown RBP11.58□□□□□ -0.56
SMAD3-208ENST00000558827 RNF111Q6ZNA4 994 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 COMMD6Q7Z4G1 85 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 CHERPQ8IWX8 916 aaKnown RBP11.58□□□□□ -0.56
SMAD3-208ENST00000558827 GHDCQ8N2G8 530 aa11.58□□□□□ -0.56
SMAD3-208ENST00000558827 METTL4Q8N3J2 472 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms