RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	GTF3C1	Q12789	2109 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787		A0A087WUV0	522 aa	Predicted RBP	6.5	□□□□□ -1.37
MARK3-215	ENST00000558787		A0A0G2JMM0	328 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787		A0A1B0GTH9	108 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787		A0A1W2PPB8	328 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787		A0A1W2PRS3	328 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	URAD	A6NGE7	173 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	TMEM200C	A6NKL6	621 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	ENO4	A6NNW6	628 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	KIR3DP1	A8MWS1	328 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787		G3V3Y1	287 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	SAP18	O00422	153 aa	Known RBP	6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	RTCA	O00442	366 aa	Known RBP	6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	CLGN	O14967	610 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	B3GALT2	O43825	422 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	PEX1	O43933	1283 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	HS6ST1	O60243	411 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	CDC40	O60508	579 aa	Known RBP eCLIP	6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	ACSL3	O95573	720 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	IFNA16	P05015	189 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	CD1D	P15813	335 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	ABO	P16442	354 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	ZNF24	P17028	368 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	EPOR	P19235	508 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	TRHR	P34981	398 aa	Predicted RBP	6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	HSD17B3	P37058	310 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	KIR3DL1	P43629	444 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	HNMT	P50135	292 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	MEOX1	P50221	254 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	GPR143	P51810	404 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	CASP6	P55212	293 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	GPX6	P59796	221 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	STXBP1	P61764	594 aa	Known RBP	6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	CDKL1	Q00532	357 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	POU4F1	Q01851	419 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	ILF2	Q12905	390 aa	Known RBP	6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	DLG1	Q12959	904 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	NAB1	Q13506	487 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	BMPR2	Q13873	1038 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	ZNF630	Q2M218	657 aa	Predicted RBP	6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	LCE1D	Q5T752	114 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	NIPAL1	Q6NVV3	410 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	ABHD17C	Q6PCB6	329 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	BNC2	Q6ZN30	1099 aa	Predicted RBP	6.5	□□□□□ -1.37
MARK3-215	ENST00000558787		Q6ZPB1	254 aa	Predicted RBP	6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	C3orf62	Q6ZUJ4	267 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	HDX	Q7Z353	690 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	SCUBE1	Q8IWY4	988 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	CTAGE3P	Q8IX95	158 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	LGI4	Q8N135	537 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	RNF175	Q8N4F7	328 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	HORMAD2	Q8N7B1	307 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	APCDD1L	Q8NCL9	501 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	B3GNT7	Q8NFL0	401 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	DOK4	Q8TEW6	326 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	CDKL2	Q92772	493 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	NCLN	Q969V3	563 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	GAL3ST3	Q96A11	431 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	CCDC77	Q9BR77	488 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	SORBS1	Q9BX66	1292 aa	Known RBP	6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	FUT8	Q9BYC5	575 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	DERL2	Q9GZP9	239 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	REXO4	Q9GZR2	422 aa	Known RBP	6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	DEFB127	Q9H1M4	99 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	CLK4	Q9HAZ1	481 aa	Known RBP	6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	DNAJC11	Q9NVH1	559 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	NSMCE4A	Q9NXX6	385 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	CD274	Q9NZQ7	290 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	KCMF1	Q9P0J7	381 aa		6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	KLF2	Q9Y5W3	355 aa	Predicted RBP	6.5	□□□□□ -1.37
MARK3-215	ENST00000558787	AKAP9	Q99996	3911 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	TCRBV9S1A1T	A0A576	114 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	PINLYP	A6NC86	204 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	ANKDD1B	A6NHY2	528 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	FAM159B	A6NKW6	160 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	WASHC1	A8K0Z3	465 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	FAM166B	A8MTA8	275 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	WWP2	O00308	870 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	CYR61	O00622	381 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	CLDN4	O14493	209 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	FCHO1	O14526	889 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	TFEC	O14948	347 aa	Predicted RBP	6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	CCNT2	O60583	730 aa	Known RBP	6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	LDB3	O75112	727 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	ITGA10	O75578	1167 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	CLEC3A	O75596	197 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	STK16	O75716	305 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	OR2J2	O76002	312 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	OR6B1	O95007	311 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	MLYCD	O95822	493 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	C1QA	P02745	245 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	NUDT17	P0C025	328 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	COX6B1	P14854	86 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	STMN1	P16949	149 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	GGT5	P36269	586 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	CLCN2	P51788	898 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	SMS	P52788	366 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	LIM2	P55344	173 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	HSD17B7	P56937	341 aa		6.49	□□□□□ -1.37
MARK3-215	ENST00000558787	RAB38	P57729	211 aa		6.49	□□□□□ -1.37

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