RNA–Protein interactions for RNA: ENST00000558339.1

SPG21-205, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-205ENST00000558339 IST1P53990 364 aa20.3■□□□□ 0.84
SPG21-205ENST00000558339 TNFRSF17Q02223 184 aa20.3■□□□□ 0.84
SPG21-205ENST00000558339 SNTB1Q13884 538 aaKnown RBP20.3■□□□□ 0.84
SPG21-205ENST00000558339 GRHL2Q6ISB3 625 aa20.3■□□□□ 0.84
SPG21-205ENST00000558339 SEM1Q6ZVN7 128 aa20.3■□□□□ 0.84
SPG21-205ENST00000558339 LRRC25Q8N386 305 aaPredicted RBP20.3■□□□□ 0.84
SPG21-205ENST00000558339 HUS1BQ8NHY5 278 aa20.3■□□□□ 0.84
SPG21-205ENST00000558339 STAG3L4Q8TBR4 150 aa20.3■□□□□ 0.84
SPG21-205ENST00000558339 SLC22A8Q8TCC7 542 aa20.3■□□□□ 0.84
SPG21-205ENST00000558339 NAPGQ99747 312 aaPredicted RBP20.3■□□□□ 0.84
SPG21-205ENST00000558339 ZNF717Q9BY31 904 aaPredicted RBP20.3■□□□□ 0.84
SPG21-205ENST00000558339 IGSF5Q9NSI5 407 aa20.3■□□□□ 0.84
SPG21-205ENST00000558339 ALKBH4Q9NXW9 302 aa20.3■□□□□ 0.84
SPG21-205ENST00000558339 GRHL1Q9NZI5 618 aa20.3■□□□□ 0.84
SPG21-205ENST00000558339 CHCHD2Q9Y6H1 151 aaPredicted RBP20.3■□□□□ 0.84
SPG21-205ENST00000558339 SUPT3HB4E1H0 165 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 EIF3HO15372 352 aaKnown RBP eCLIP20.29■□□□□ 0.84
SPG21-205ENST00000558339 SUPT3HO75486 399 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 ZWINTO95229 277 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 CLPSP04118 112 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 FBXO45P0C2W1 286 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 MTHFD2P13995 350 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 ALOX15P16050 662 aaPredicted RBP20.29■□□□□ 0.84
SPG21-205ENST00000558339 SERPINB1P30740 379 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 KCNJ2P63252 427 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 DDX39BQ13838 428 aaKnown RBP20.29■□□□□ 0.84
SPG21-205ENST00000558339 RIPPLY2Q5TAB7 128 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 C3orf62Q6ZUJ4 267 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 GPR180Q86V85 440 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 FBXW8Q8N3Y1 598 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 SLC15A4Q8N697 577 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 C7orf57Q8NEG2 295 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 OR10G3Q8NGC4 313 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 TANKQ92844 425 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 RBM18Q96H35 190 aaKnown RBP20.29■□□□□ 0.84
SPG21-205ENST00000558339 SLC6A15Q9H2J7 730 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 EXO5Q9H790 373 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 SLC24A3Q9HC58 644 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 PRM3Q9NNZ6 103 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 ZFP64Q9NPA5 681 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 DMRT3Q9NQL9 472 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 MS4A12Q9NXJ0 267 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 WHRNQ9P202 907 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 OPTCQ9UBM4 332 aa20.29■□□□□ 0.84
SPG21-205ENST00000558339 CNOT11Q9UKZ1 510 aaKnown RBP20.29■□□□□ 0.84
SPG21-205ENST00000558339 KERAO60938 352 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 CTAG2O75638 210 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 LRATO95237 230 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 SPRP35270 261 aaPredicted RBP20.28■□□□□ 0.84
SPG21-205ENST00000558339 PAFAH1B1P43034 410 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 HERVK_113P63132 956 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 ERVK-8P63133 956 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 PLIN5Q00G26 463 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 SLC25A35Q3KQZ1 300 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 GRTP1Q5TC63 336 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 MRM1Q6IN84 353 aaKnown RBP20.28■□□□□ 0.84
SPG21-205ENST00000558339 ARSKQ6UWY0 536 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 WDR53Q7Z5U6 358 aaPredicted RBP20.28■□□□□ 0.84
SPG21-205ENST00000558339 CTAGE3PQ8IX95 158 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 ULK2Q8IYT8 1036 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 ST13P4Q8IZP2 240 aaPredicted RBP20.28■□□□□ 0.84
SPG21-205ENST00000558339 ZCCHC7Q8N3Z6 543 aaKnown RBP20.28■□□□□ 0.84
SPG21-205ENST00000558339 RGMAQ96B86 450 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 ART5Q96L15 291 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 ERP44Q9BS26 406 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 ERVK-6Q9BXR3 956 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 ACKR4Q9NPB9 350 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 BOKQ9UMX3 212 aaPredicted RBP20.28■□□□□ 0.84
SPG21-205ENST00000558339 ERVK-19Q9WJR5 959 aa20.28■□□□□ 0.84
SPG21-205ENST00000558339 NCKAP5O14513 1909 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 MAP1AP78559 2803 aaPredicted RBP20.27■□□□□ 0.84
SPG21-205ENST00000558339 KDM4EB2RXH2 506 aaPredicted RBP20.27■□□□□ 0.84
SPG21-205ENST00000558339 PROM1O43490 865 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 DIAPH2O60879 1101 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 GABRA1P14867 456 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 PIK3CBP42338 1070 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 RPS13P62277 151 aaKnown RBP20.27■□□□□ 0.84
SPG21-205ENST00000558339 BIKQ13323 160 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 ZNF267Q14586 743 aaPredicted RBP20.27■□□□□ 0.84
SPG21-205ENST00000558339 EBPQ15125 230 aaKnown RBP20.27■□□□□ 0.84
SPG21-205ENST00000558339 SPRED3Q2MJR0 410 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 KBTBD12Q3ZCT8 623 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 ZZZ3Q8IYH5 903 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 TEX9Q8N6V9 391 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 PPM1NQ8N819 430 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 FAM13CQ8NE31 585 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 MYRIPQ8NFW9 859 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 NEIL3Q8TAT5 605 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 UCN3Q969E3 161 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 GAL3ST4Q96RP7 486 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 MTERF1Q99551 399 aaKnown RBP20.27■□□□□ 0.84
SPG21-205ENST00000558339 TMUB1Q9BVT8 246 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 WWTR1Q9GZV5 400 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 CXXC4Q9H2H0 198 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 LIME1Q9H400 295 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 NMRAL1Q9HBL8 299 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 ZNF358Q9NW07 568 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 DNAJB12Q9NXW2 375 aaKnown RBP20.27■□□□□ 0.84
SPG21-205ENST00000558339 PHF11Q9UIL8 331 aa20.27■□□□□ 0.84
SPG21-205ENST00000558339 ASB4Q9Y574 426 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms