RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 C9orf40Q8IXQ3 194 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 GSPT2Q8IYD1 628 aaKnown RBP11.04□□□□□ -0.64
HERC1-202ENST00000558324 CEP112Q8N8E3 955 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 ZFP62Q8NB50 900 aaPredicted RBP11.04□□□□□ -0.64
HERC1-202ENST00000558324 OR2M7Q8NG81 312 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 OR4F6Q8NGB9 312 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 OR52N2Q8NGI0 321 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 OR5L2Q8NGL0 311 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 OR8K3Q8NH51 312 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 SENP5Q96HI0 755 aaPredicted RBP11.04□□□□□ -0.64
HERC1-202ENST00000558324 FBXL20Q96IG2 436 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 PHF12Q96QT6 1004 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 SERPINI1Q99574 410 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 MRPL57Q9BQC6 102 aaKnown RBP11.04□□□□□ -0.64
HERC1-202ENST00000558324 RHOXF2Q9BQY4 288 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 MRPL1Q9BYD6 325 aaKnown RBP11.04□□□□□ -0.64
HERC1-202ENST00000558324 DEFB127Q9H1M4 99 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 ELOVL6Q9H5J4 265 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 DDX31Q9H8H2 851 aaKnown RBP11.04□□□□□ -0.64
HERC1-202ENST00000558324 WDR41Q9HAD4 459 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 TEX10Q9NXF1 929 aaPredicted RBP11.04□□□□□ -0.64
HERC1-202ENST00000558324 ENTPD4Q9Y227 616 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 MEMO1Q9Y316 297 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 ASB4Q9Y574 426 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 IQANK1A0A1B0GTG1 560 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 A0A1W2PS29 197 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 ACOT7O00154 380 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 FOXE1O00358 373 aaPredicted RBP11.03□□□□□ -0.64
HERC1-202ENST00000558324 PPP6CO00743 305 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 SEMA3DO95025 777 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 GPR75O95800 540 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 IGKV3-11P04433 115 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 KLK1P06870 262 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 RPS17P08708 135 aaKnown RBP11.03□□□□□ -0.64
HERC1-202ENST00000558324 SBK3P0C264 359 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 CCL3P10147 92 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 GCAP28676 217 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 PTGS2P35354 604 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 DNASE1L1P49184 302 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 SMSP52788 366 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 ARFIP1P53367 373 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 PPIAP62937 165 aaKnown RBP11.03□□□□□ -0.64
HERC1-202ENST00000558324 IFT88Q13099 833 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 CDSNQ15517 529 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 OR52E8Q6IFG1 317 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 MRM1Q6IN84 353 aaKnown RBP11.03□□□□□ -0.64
HERC1-202ENST00000558324 LETMD1Q6P1Q0 360 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 OPN5Q6U736 354 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 BNC2Q6ZN30 1099 aaPredicted RBP11.03□□□□□ -0.64
HERC1-202ENST00000558324 RNF111Q6ZNA4 994 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 FAM47EQ6ZV65 393 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 IFT20Q8IY31 132 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 ST13P4Q8IZP2 240 aaPredicted RBP11.03□□□□□ -0.64
HERC1-202ENST00000558324 SLC34A3Q8N130 599 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 C16orf52Q8NHV5 167 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 SLC22A8Q8TCC7 542 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 RIT1Q92963 219 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 ART5Q96L15 291 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 HBEGFQ99075 208 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 NTMT1Q9BV86 223 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 TTTY12Q9BZ98 90 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 FARSBQ9NSD9 589 aaKnown RBP11.03□□□□□ -0.64
HERC1-202ENST00000558324 PPT2Q9UMR5 302 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 SLC12A4Q9UP95 1085 aa11.03□□□□□ -0.64
HERC1-202ENST00000558324 DIDO1Q9BTC0 2240 aaKnown RBP11.03□□□□□ -0.64
HERC1-202ENST00000558324 GOLGA8RI6L899 631 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 PGRMC2O15173 223 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 RIPK2O43353 540 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 LRATO95237 230 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 OTCP00480 354 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 P04436 131 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 ABHD2P08910 425 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 FAM153BP0C7A2 387 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 PRF1P14222 555 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 PIK3R1P27986 724 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 SSTR4P31391 388 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 PIGAP37287 484 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 FAM153CQ494X1 144 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 LGSNQ5TDP6 509 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 PRAMEF20Q5VT98 475 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 XKRXQ6PP77 449 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 GK5Q6ZS86 529 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 TRMT10CQ7L0Y3 403 aaKnown RBP11.02□□□□□ -0.65
HERC1-202ENST00000558324 SLC29A4Q7RTT9 530 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 C7orf57Q8NEG2 295 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 OR5M3Q8NGP4 307 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 NUBPLQ8TB37 319 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 FAM57AQ8TBR7 257 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 TRPC4APQ8TEL6 797 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 ZNF483Q8TF39 744 aaPredicted RBP11.02□□□□□ -0.65
HERC1-202ENST00000558324 FAM173AQ9BQD7 235 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 PELOQ9BRX2 385 aaKnown RBP11.02□□□□□ -0.65
HERC1-202ENST00000558324 SACM1LQ9NTJ5 587 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.02□□□□□ -0.65
HERC1-202ENST00000558324 TMEM216Q9P0N5 145 aa11.02□□□□□ -0.65
HERC1-202ENST00000558324 KLF2Q9Y5W3 355 aaPredicted RBP11.02□□□□□ -0.65
HERC1-202ENST00000558324 E9PLN8 166 aa11.01□□□□□ -0.65
HERC1-202ENST00000558324 ADAM10O14672 748 aa11.01□□□□□ -0.65
HERC1-202ENST00000558324 SUPT7LO94864 414 aa11.01□□□□□ -0.65
HERC1-202ENST00000558324 OR4F21O95013 312 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms