RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 A0A0G2JN53 185 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 IQANK1A0A1B0GTG1 560 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 MYOCOSA0A1B0GUC4 107 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 GRID2IPA4D2P6 1211 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 ANKRD33BA6NCL7 494 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 LRIT2A6NDA9 550 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 ANKDD1BA6NHY2 528 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 SDR42E2A6NKP2 422 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 KDM4EB2RXH2 506 aaPredicted RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 TGFBR3LH3BV60 316 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 CYR61O00622 381 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 CTIFO43310 598 aaKnown RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 ERI3O43414 337 aaKnown RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 TLX2O43763 284 aaPredicted RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 TRIM3O75382 744 aaPredicted RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 HAUS5O94927 633 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 SNX4O95219 450 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 GUCA1CO95843 209 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 ACTL6AO96019 429 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 IGHA1P01876 353 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 HPNP05981 417 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 ZSCAN5DPP0CG00 497 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 C1GALT1C1LP0DN25 315 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 PAX1P15863 534 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 TPSB2P20231 275 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 GSTM2P28161 218 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 MSH2P43246 934 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 MASP1P48740 699 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 PTH2RP49190 550 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 PCYT1AP49585 367 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 CDK9P50750 372 aaKnown RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 HNRNPFP52597 415 aaKnown RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 MTTPP55157 894 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 LIM2P55344 173 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 IL2P60568 153 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 RPP38P78345 283 aaKnown RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 REEP5Q00765 189 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 TGM3Q08188 693 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 DMTNQ08495 405 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 TOMM20Q15388 145 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 TPSAB1Q15661 275 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 CCNG2Q16589 344 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 SEL1L2Q5TEA6 688 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 PRAMEF20Q5VT98 475 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 TRIM40Q6P9F5 258 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 PAQR3Q6TCH7 311 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 GSTA5Q7RTV2 222 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 THOC6Q86W42 341 aaKnown RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 HIPK1Q86Z02 1210 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 DENND6AQ8IWF6 608 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 TAGAPQ8N103 731 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 KRT78Q8N1N4 520 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 ZNF321PQ8N8H1 164 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 ZNF441Q8N8Z8 693 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 LRRC57Q8N9N7 239 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 FAM47BQ8NA70 645 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 C9orf106Q8NAJ2 232 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 TMEM52Q8NDY8 209 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 FAM13CQ8NE31 585 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 SRFBP1Q8NEF9 429 aaKnown RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 OR2L5Q8NG80 312 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 ZNF721Q8TF20 911 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 TMEM171Q8WVE6 324 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 ANKRD7Q92527 254 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 DIO2Q92813 273 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 ABTB1Q969K4 478 aaPredicted RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 FBXL8Q96CD0 374 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 MS4A6EQ96DS6 147 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 PIK3IP1Q96FE7 263 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 WDYHV1Q96HA8 205 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 ART5Q96L15 291 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 ZNF597Q96LX8 424 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 WFIKKN1Q96NZ8 548 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 UGT2B28Q9BY64 529 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 ROGDIQ9GZN7 287 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 PITHD1Q9GZP4 211 aaPredicted RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 CXorf56Q9H5V9 222 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 COPS7BQ9H9Q2 264 aaPredicted RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 PROK2Q9HC23 129 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 YAE1D1Q9NRH1 226 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 HOMER3Q9NSC5 361 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.74□□□□□ -1.65
SPG11-208ENST00000558155 C6orf203Q9P0P8 240 aaPredicted RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 FBXO5Q9UKT4 447 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 DAPP1Q9UN19 280 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 PACSIN2Q9UNF0 486 aaPredicted RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 SLC22A14Q9Y267 594 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 SLC6A5Q9Y345 797 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 CHCHD2Q9Y6H1 151 aaPredicted RBP4.74□□□□□ -1.65
SPG11-208ENST00000558155 SPACA6W5XKT8 324 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 TLN2Q9Y4G6 2542 aa4.74□□□□□ -1.65
SPG11-208ENST00000558155 MED12LQ86YW9 2145 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 ABCA1O95477 2261 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 SLC35F4A4IF30 521 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 LRRC3CA6NJW4 275 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 DEFB108AA8MXU0 73 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
SPG11-208ENST00000558155 MSTNO14793 375 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 LDB3O75112 727 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 CDH16O75309 829 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms