RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 TBC1D31Q96DN5 1066 aa5.34□□□□□ -1.55
RTF1-204ENST00000558117 MTERF1Q99551 399 aaKnown RBP5.34□□□□□ -1.55
RTF1-204ENST00000558117 C19orf24Q9BVV8 132 aa5.34□□□□□ -1.55
RTF1-204ENST00000558117 LRRC2Q9BYS8 371 aa5.34□□□□□ -1.55
RTF1-204ENST00000558117 CSTL1Q9H114 145 aa5.34□□□□□ -1.55
RTF1-204ENST00000558117 XAB2Q9HCS7 855 aaKnown RBP5.34□□□□□ -1.55
RTF1-204ENST00000558117 APMAPQ9HDC9 416 aa5.34□□□□□ -1.55
RTF1-204ENST00000558117 TCF7L2Q9NQB0 619 aa5.34□□□□□ -1.55
RTF1-204ENST00000558117 GDAP2Q9NXN4 497 aa5.34□□□□□ -1.55
RTF1-204ENST00000558117 C2CD2Q9Y426 696 aa5.34□□□□□ -1.55
RTF1-204ENST00000558117 LYVE1Q9Y5Y7 322 aa5.34□□□□□ -1.55
RTF1-204ENST00000558117 NCOA6Q14686 2063 aaPredicted RBP5.34□□□□□ -1.55
RTF1-204ENST00000558117 TRGV8A0A0C4DH27 118 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 A6NL46 340 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 JRKO75564 520 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 HLA-DOBP13765 273 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 CD1CP29017 333 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 PSMB10P40306 273 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 CA7P43166 264 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 DLX5P56178 289 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 OR1D5P58170 312 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 PFN3P60673 137 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 ST8SIA6P61647 398 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 RELQ04864 619 aaPredicted RBP5.33□□□□□ -1.56
RTF1-204ENST00000558117 ACSM2AQ08AH3 577 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 LRMPQ12912 555 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 KRT81Q14533 505 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 ELAVL3Q14576 367 aaKnown RBP5.33□□□□□ -1.56
RTF1-204ENST00000558117 ZRSR1Q15695 479 aaKnown RBP5.33□□□□□ -1.56
RTF1-204ENST00000558117 KYAT1Q16773 422 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 MDH1BQ5I0G3 518 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 PIP5KL1Q5T9C9 394 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 SEL1L3Q68CR1 1132 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 GFRALQ6UXV0 394 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 ZNF771Q7L3S4 317 aaPredicted RBP5.33□□□□□ -1.56
RTF1-204ENST00000558117 CAMKMTQ7Z624 323 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 TMEM219Q86XT9 240 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 DAW1Q8N136 415 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 OR8H3Q8N146 312 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 NAT8LQ8N9F0 302 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 OR4D9Q8NGE8 314 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 ARHGEF2Q92974 986 aaKnown RBP5.33□□□□□ -1.56
RTF1-204ENST00000558117 ABTB1Q969K4 478 aaPredicted RBP5.33□□□□□ -1.56
RTF1-204ENST00000558117 ARHGEF26Q96DR7 871 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 ZNF560Q96MR9 790 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 KCNK16Q96T55 309 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 KLF6Q99612 283 aaPredicted RBP5.33□□□□□ -1.56
RTF1-204ENST00000558117 RWDD1Q9H446 243 aaPredicted RBP5.33□□□□□ -1.56
RTF1-204ENST00000558117 EVA1AQ9H8M9 152 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 UBTD1Q9HAC8 227 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 FBXO8Q9NRD0 319 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 GPR83Q9NYM4 423 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 VPS54Q9P1Q0 977 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 CPSF3Q9UKF6 684 aaKnown RBP5.33□□□□□ -1.56
RTF1-204ENST00000558117 PADI1Q9ULC6 663 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 ODF2LQ9ULJ1 636 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 MAU2Q9Y6X3 613 aa5.33□□□□□ -1.56
RTF1-204ENST00000558117 ARHGEF35A5YM69 484 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 GOLGA6L9A6NEM1 432 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 CLDN5O00501 218 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 OGTO15294 1046 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 NUDT21O43809 227 aaKnown RBP5.32□□□□□ -1.56
RTF1-204ENST00000558117 SLC25A12O75746 678 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 CCNDBP1O95273 360 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 IPO7O95373 1038 aaKnown RBP5.32□□□□□ -1.56
RTF1-204ENST00000558117 QDPRP09417 244 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 CASP14P31944 242 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 CSKP41240 450 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 FUT6P51993 359 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 PPP5CP53041 499 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 PDE1BQ01064 536 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 DEFA6Q01524 100 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 OTUD4Q01804 1114 aaKnown RBP5.32□□□□□ -1.56
RTF1-204ENST00000558117 PPARDQ03181 441 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 NIPAL4Q0D2K0 466 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 ELOCQ15369 112 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 KYNUQ16719 465 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 DEFB113Q30KQ7 82 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 MPPE1Q53F39 396 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 LRIF1Q5T3J3 769 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 IRAK1BP1Q5VVH5 260 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 LYPLAL1Q5VWZ2 237 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 IKBIPQ70UQ0 350 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 NRROSQ86YC3 692 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 ARHGAP12Q8IWW6 846 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 C1orf87Q8N0U7 546 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 TAGAPQ8N103 731 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 CCDC148Q8NFR7 591 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 MGARPQ8TDB4 240 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 HARBI1Q96MB7 349 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 AGAP3Q96P47 875 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 ZNF559Q9BR84 538 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 ELOVL4Q9GZR5 314 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 ACTL8Q9H568 366 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 ASB7Q9H672 318 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 NMUR1Q9HB89 426 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 COMMD8Q9NX08 183 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 TMEM9Q9P0T7 183 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 ARMCX1Q9P291 453 aa5.32□□□□□ -1.56
RTF1-204ENST00000558117 ACSL5Q9ULC5 683 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms