RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 DUSP11O75319 330 aaKnown RBP2.54□□□□□ -2
SPG11-206ENST00000558093 VENTXO95231 258 aa2.54□□□□□ -2
SPG11-206ENST00000558093 GSTA2P09210 222 aa2.54□□□□□ -2
SPG11-206ENST00000558093 SUPT20HL2P0C7V6 817 aa2.54□□□□□ -2
SPG11-206ENST00000558093 SKILP12757 684 aa2.54□□□□□ -2
SPG11-206ENST00000558093 STMN1P16949 149 aa2.54□□□□□ -2
SPG11-206ENST00000558093 CASTP20810 708 aaKnown RBP2.54□□□□□ -2
SPG11-206ENST00000558093 HOXD10P28358 340 aa2.54□□□□□ -2
SPG11-206ENST00000558093 STIP1P31948 543 aaKnown RBP2.54□□□□□ -2
SPG11-206ENST00000558093 FHITP49789 147 aa2.54□□□□□ -2
SPG11-206ENST00000558093 IST1P53990 364 aa2.54□□□□□ -2
SPG11-206ENST00000558093 TRA2BP62995 288 aaKnown RBP2.54□□□□□ -2
SPG11-206ENST00000558093 SCARB2Q14108 478 aa2.54□□□□□ -2
SPG11-206ENST00000558093 CNPY1Q3B7I2 92 aa2.54□□□□□ -2
SPG11-206ENST00000558093 TIMM50Q3ZCQ8 353 aa2.54□□□□□ -2
SPG11-206ENST00000558093 SIGLEC15Q6ZMC9 328 aa2.54□□□□□ -2
SPG11-206ENST00000558093 MSANTD1Q6ZTZ1 278 aa2.54□□□□□ -2
SPG11-206ENST00000558093 CCDC91Q7Z6B0 441 aa2.54□□□□□ -2
SPG11-206ENST00000558093 CACUL1Q86Y37 369 aa2.54□□□□□ -2
SPG11-206ENST00000558093 NHLRC2Q8NBF2 726 aa2.54□□□□□ -2
SPG11-206ENST00000558093 CCDC197Q8NCU1 140 aa2.54□□□□□ -2
SPG11-206ENST00000558093 ICA1LQ8NDH6 482 aa2.54□□□□□ -2
SPG11-206ENST00000558093 MNS1Q8NEH6 495 aa2.54□□□□□ -2
SPG11-206ENST00000558093 OR6T1Q8NGN1 323 aa2.54□□□□□ -2
SPG11-206ENST00000558093 SPATA18Q8TC71 538 aa2.54□□□□□ -2
SPG11-206ENST00000558093 ZNF75CPQ92670 426 aaPredicted RBP2.54□□□□□ -2
SPG11-206ENST00000558093 CORO2AQ92828 525 aa2.54□□□□□ -2
SPG11-206ENST00000558093 CCDC94Q9BW85 323 aaPredicted RBP2.54□□□□□ -2
SPG11-206ENST00000558093 TMEM161AQ9NX61 479 aa2.54□□□□□ -2
SPG11-206ENST00000558093 C6orf203Q9P0P8 240 aaPredicted RBP2.54□□□□□ -2
SPG11-206ENST00000558093 ARMCX1Q9P291 453 aa2.54□□□□□ -2
SPG11-206ENST00000558093 PCSK1NQ9UHG2 260 aa2.54□□□□□ -2
SPG11-206ENST00000558093 CFAP45Q9UL16 551 aa2.54□□□□□ -2
SPG11-206ENST00000558093 EXOC6BQ9Y2D4 811 aa2.54□□□□□ -2
SPG11-206ENST00000558093 KNSTRNQ9Y448 316 aa2.54□□□□□ -2
SPG11-206ENST00000558093 ATP6V0A2Q9Y487 856 aa2.54□□□□□ -2
SPG11-206ENST00000558093 ZNF646O15015 1829 aaPredicted RBP2.54□□□□□ -2
SPG11-206ENST00000558093 ATAD2BQ9ULI0 1458 aa2.53□□□□□ -2
SPG11-206ENST00000558093 PIK3R4Q99570 1358 aa2.53□□□□□ -2
SPG11-206ENST00000558093 TRAV9-2A0A087WT02 112 aa2.53□□□□□ -2
SPG11-206ENST00000558093 ZNF724A8MTY0 619 aa2.53□□□□□ -2
SPG11-206ENST00000558093 ZNF487B1APH4 448 aa2.53□□□□□ -2
SPG11-206ENST00000558093 SLC7A4O43246 635 aa2.53□□□□□ -2
SPG11-206ENST00000558093 KLHL41O60662 606 aa2.53□□□□□ -2
SPG11-206ENST00000558093 ZNF253O75346 499 aa2.53□□□□□ -2
SPG11-206ENST00000558093 FRAT2O75474 233 aaPredicted RBP2.53□□□□□ -2
SPG11-206ENST00000558093 CRCPO75575 148 aa2.53□□□□□ -2
SPG11-206ENST00000558093 RHBDL1O75783 438 aa2.53□□□□□ -2
SPG11-206ENST00000558093 GOSR1O95249 250 aa2.53□□□□□ -2
SPG11-206ENST00000558093 PIGRP01833 764 aa2.53□□□□□ -2
SPG11-206ENST00000558093 FHP07954 510 aa2.53□□□□□ -2
SPG11-206ENST00000558093 UMPSP11172 480 aa2.53□□□□□ -2
SPG11-206ENST00000558093 SCG2P13521 617 aa2.53□□□□□ -2
SPG11-206ENST00000558093 CALML3P27482 149 aa2.53□□□□□ -2
SPG11-206ENST00000558093 GJB2P29033 226 aa2.53□□□□□ -2
SPG11-206ENST00000558093 KCNJ1P48048 391 aa2.53□□□□□ -2
SPG11-206ENST00000558093 IL1RL1Q01638 556 aa2.53□□□□□ -2
SPG11-206ENST00000558093 NAAAQ02083 359 aa2.53□□□□□ -2
SPG11-206ENST00000558093 UBXN1Q04323 297 aa2.53□□□□□ -2
SPG11-206ENST00000558093 ABRAXAS2Q15018 415 aa2.53□□□□□ -2
SPG11-206ENST00000558093 PCK2Q16822 640 aa2.53□□□□□ -2
SPG11-206ENST00000558093 WSCD2Q2TBF2 565 aa2.53□□□□□ -2
SPG11-206ENST00000558093 ANKDD1AQ495B1 522 aa2.53□□□□□ -2
SPG11-206ENST00000558093 MPP7Q5T2T1 576 aa2.53□□□□□ -2
SPG11-206ENST00000558093 RFWD3Q6PCD5 774 aa2.53□□□□□ -2
SPG11-206ENST00000558093 PODNL1Q6PEZ8 512 aa2.53□□□□□ -2
SPG11-206ENST00000558093 DCLRE1AQ6PJP8 1040 aa2.53□□□□□ -2
SPG11-206ENST00000558093 KDELC1Q6UW63 502 aa2.53□□□□□ -2
SPG11-206ENST00000558093 CCDC170Q8IYT3 715 aa2.53□□□□□ -2
SPG11-206ENST00000558093 TBC1D21Q8IYX1 336 aa2.53□□□□□ -2
SPG11-206ENST00000558093 ZNF619Q8N2I2 560 aa2.53□□□□□ -2
SPG11-206ENST00000558093 ZNF540Q8NDQ6 660 aa2.53□□□□□ -2
SPG11-206ENST00000558093 IPMKQ8NFU5 416 aa2.53□□□□□ -2
SPG11-206ENST00000558093 GOT1L1Q8NHS2 421 aaPredicted RBP2.53□□□□□ -2
SPG11-206ENST00000558093 MRAPQ8TCY5 172 aa2.53□□□□□ -2
SPG11-206ENST00000558093 BRSK1Q8TDC3 778 aa2.53□□□□□ -2
SPG11-206ENST00000558093 ANKRD49Q8WVL7 239 aa2.53□□□□□ -2
SPG11-206ENST00000558093 TCP11Q8WWU5 503 aa2.53□□□□□ -2
SPG11-206ENST00000558093 ESAMQ96AP7 390 aa2.53□□□□□ -2
SPG11-206ENST00000558093 ZNF396Q96N95 335 aaPredicted RBP2.53□□□□□ -2
SPG11-206ENST00000558093 ZIM3Q96PE6 472 aa2.53□□□□□ -2
SPG11-206ENST00000558093 ERGIC2Q96RQ1 377 aa2.53□□□□□ -2
SPG11-206ENST00000558093 MCCC1Q96RQ3 725 aaPredicted RBP2.53□□□□□ -2
SPG11-206ENST00000558093 TEX13BQ9BXU2 312 aa2.53□□□□□ -2
SPG11-206ENST00000558093 SLITRK2Q9H156 845 aa2.53□□□□□ -2
SPG11-206ENST00000558093 RWDD1Q9H446 243 aaPredicted RBP2.53□□□□□ -2
SPG11-206ENST00000558093 NT5DC2Q9H857 520 aa2.53□□□□□ -2
SPG11-206ENST00000558093 YY1AP1Q9H869 796 aa2.53□□□□□ -2
SPG11-206ENST00000558093 SRD5A3Q9H8P0 318 aa2.53□□□□□ -2
SPG11-206ENST00000558093 ELL3Q9HB65 397 aaPredicted RBP2.53□□□□□ -2
SPG11-206ENST00000558093 TUFT1Q9NNX1 390 aa2.53□□□□□ -2
SPG11-206ENST00000558093 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.53□□□□□ -2
SPG11-206ENST00000558093 PLEK2Q9NYT0 353 aa2.53□□□□□ -2
SPG11-206ENST00000558093 DHRS4-AS1Q9P1J3 65 aa2.53□□□□□ -2
SPG11-206ENST00000558093 VPS18Q9P253 973 aa2.53□□□□□ -2
SPG11-206ENST00000558093 EIF3KQ9UBQ5 218 aaKnown RBP2.53□□□□□ -2
SPG11-206ENST00000558093 CTNNA3Q9UI47 895 aa2.53□□□□□ -2
SPG11-206ENST00000558093 SH3BGRL2Q9UJC5 107 aa2.53□□□□□ -2
SPG11-206ENST00000558093 LAMP5Q9UJQ1 280 aa2.53□□□□□ -2
SPG11-206ENST00000558093 N6AMT1Q9Y5N5 214 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms