RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 C1orf189Q5VU69 101 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 C18orf63Q68DL7 685 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 REP15Q6BDI9 236 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 OR4F3Q6IEY1 312 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 RIPOR1Q6ZS17 1223 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 ST13P4Q8IZP2 240 aaPredicted RBP11.67□□□□□ -0.54
TPM1-209ENST00000558072 OR5T3Q8NGG3 340 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 GOT1L1Q8NHS2 421 aaPredicted RBP11.67□□□□□ -0.54
TPM1-209ENST00000558072 MR1Q95460 341 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 EXOSC8Q96B26 276 aaKnown RBP11.67□□□□□ -0.54
TPM1-209ENST00000558072 ART5Q96L15 291 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 PHF12Q96QT6 1004 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 GPR87Q9BY21 358 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 THSD1Q9NS62 852 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 RYDENQ9NUL5 291 aaKnown RBP11.67□□□□□ -0.54
TPM1-209ENST00000558072 CROTQ9UKG9 612 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 CFAP54Q96N23 3096 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 TEX51A0A1B0GUA7 166 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 VSTM2BA6NLU5 285 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 C21orf140B9A014 251 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 PGRMC2O15173 223 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 OR10H2O60403 315 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 B4GALT2O60909 372 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 DXOO77932 396 aaKnown RBP11.66□□□□□ -0.54
TPM1-209ENST00000558072 ATP1B1P05026 303 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 HEXBP07686 556 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 ZGLP1P0C6A0 271 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 CPMP14384 443 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 ZNF28P17035 718 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 CAPN3P20807 821 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 UQCRC2P22695 453 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 ID4P47928 161 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 ZFP36L2P47974 494 aaKnown RBP11.66□□□□□ -0.54
TPM1-209ENST00000558072 NCBP2P52298 156 aaKnown RBP eCLIP11.66□□□□□ -0.54
TPM1-209ENST00000558072 DGKQP52824 942 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 GABREP78334 506 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 IGLV3-21P80748 117 aaPredicted RBP11.66□□□□□ -0.54
TPM1-209ENST00000558072 FOLH1Q04609 750 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 MINDY4Q4G0A6 757 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 LRIF1Q5T3J3 769 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 MFSD4BQ5TF39 518 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 ZNF385CQ66K41 422 aaPredicted RBP11.66□□□□□ -0.54
TPM1-209ENST00000558072 TMEM64Q6YI46 380 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 ZNF517Q6ZMY9 492 aaPredicted RBP11.66□□□□□ -0.54
TPM1-209ENST00000558072 ZNF771Q7L3S4 317 aaPredicted RBP11.66□□□□□ -0.54
TPM1-209ENST00000558072 DHDDSQ86SQ9 333 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 TMEM151BQ8IW70 566 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 SCUBE1Q8IWY4 988 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 NLGN4XQ8N0W4 816 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 PGAM4Q8N0Y7 254 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 POU5F2Q8N7G0 328 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 NLGN4YQ8NFZ3 816 aaPredicted RBP11.66□□□□□ -0.54
TPM1-209ENST00000558072 OR4A15Q8NGL6 344 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 PSMA8Q8TAA3 256 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 STT3BQ8TCJ2 826 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 SFXN5Q8TD22 340 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 GTF2H4Q92759 462 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 VPS33AQ96AX1 596 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 LRRC58Q96CX6 371 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 RCN3Q96D15 328 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 PTCHD1Q96NR3 888 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 SLC46A1Q96NT5 459 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 DGAT2Q96PD7 388 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 BTBD10Q9BSF8 475 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 SLC52A3Q9NQ40 469 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 THUMPD1Q9NXG2 353 aaKnown RBP11.66□□□□□ -0.54
TPM1-209ENST00000558072 PTGFRNQ9P2B2 879 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 KCND3Q9UK17 655 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 ACSL6Q9UKU0 697 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 PRPF19Q9UMS4 504 aaKnown RBP11.66□□□□□ -0.54
TPM1-209ENST00000558072 EXO1Q9UQ84 846 aaKnown RBP11.66□□□□□ -0.54
TPM1-209ENST00000558072 SEC16AO15027 2179 aa11.66□□□□□ -0.54
TPM1-209ENST00000558072 TTC36A6NLP5 189 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.65□□□□□ -0.54
TPM1-209ENST00000558072 BRINP1O60477 761 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 DLGAP3O95886 979 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 STT3AP46977 705 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 EMP2P54851 167 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 FOXL2P58012 376 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 MAT1AQ00266 395 aaKnown RBP11.65□□□□□ -0.54
TPM1-209ENST00000558072 VAC14Q08AM6 782 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 RTP5Q14D33 572 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 SPDYE7PQ495Y7 208 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 MLIPQ5VWP3 458 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 MRPL14Q6P1L8 145 aaKnown RBP11.65□□□□□ -0.54
TPM1-209ENST00000558072 ZNF621Q6ZSS3 439 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 ZC3H7AQ8IWR0 971 aaKnown RBP11.65□□□□□ -0.54
TPM1-209ENST00000558072 TNIP2Q8NFZ5 429 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 OR8J3Q8NGG0 315 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 OR56A1Q8NGH5 318 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 ZNF675Q8TD23 568 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 DAZLQ92904 295 aaKnown RBP11.65□□□□□ -0.54
TPM1-209ENST00000558072 MCUR1Q96AQ8 359 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 KIAA1143Q96AT1 154 aaPredicted RBP11.65□□□□□ -0.54
TPM1-209ENST00000558072 NXPE2Q96DL1 559 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 AMDHD1Q96NU7 426 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 CSF3RQ99062 836 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 SPATA9Q9BWV2 254 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 ALOXE3Q9BYJ1 711 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 FOXJ2Q9P0K8 574 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms