RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 FAM71E1Q6IPT2 247 aa23.87■■□□□ 1.41
SMAD6-202ENST00000557916 WDR75Q8IWA0 830 aaKnown RBP23.87■■□□□ 1.41
SMAD6-202ENST00000557916 ST13P4Q8IZP2 240 aaPredicted RBP23.87■■□□□ 1.41
SMAD6-202ENST00000557916 PTPMT1Q8WUK0 201 aaPredicted RBP23.87■■□□□ 1.41
SMAD6-202ENST00000557916 DAZLQ92904 295 aaKnown RBP23.87■■□□□ 1.41
SMAD6-202ENST00000557916 PPWD1Q96BP3 646 aaKnown RBP23.87■■□□□ 1.41
SMAD6-202ENST00000557916 NUDT9Q9BW91 350 aa23.87■■□□□ 1.41
SMAD6-202ENST00000557916 AKTIPQ9H8T0 292 aa23.87■■□□□ 1.41
SMAD6-202ENST00000557916 MEAF6Q9HAF1 191 aa23.87■■□□□ 1.41
SMAD6-202ENST00000557916 SLCO1B3Q9NPD5 702 aa23.87■■□□□ 1.41
SMAD6-202ENST00000557916 ZFYVE26Q68DK2 2539 aa23.87■■□□□ 1.41
SMAD6-202ENST00000557916 OR10H2O60403 315 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 ERAL1O75616 437 aaKnown RBP23.86■■□□□ 1.41
SMAD6-202ENST00000557916 SLC35E2P0CK97 266 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 ITGAMP11215 1152 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 BCKDHAP12694 445 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 COX7A2P14406 83 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 SDC1P18827 310 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 LY6DQ14210 128 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 IKBIPQ70UQ0 350 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 B3GNT7Q8NFL0 401 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 OR14A16Q8NHC5 309 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 KLHL29Q96CT2 875 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 EGLN2Q96KS0 407 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 PELOQ9BRX2 385 aaKnown RBP23.86■■□□□ 1.41
SMAD6-202ENST00000557916 C1orf50Q9BV19 199 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 MMP25Q9NPA2 562 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 UTS2RQ9UKP6 389 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 IGSF10Q6WRI0 2623 aa23.86■■□□□ 1.41
SMAD6-202ENST00000557916 A0A1W2PS29 197 aa23.85■■□□□ 1.41
SMAD6-202ENST00000557916 TRPC5OSA6NMA1 111 aa23.85■■□□□ 1.41
SMAD6-202ENST00000557916 C17orf105B2RV13 164 aa23.85■■□□□ 1.41
SMAD6-202ENST00000557916 ATXN7O15265 892 aaPredicted RBP23.85■■□□□ 1.41
SMAD6-202ENST00000557916 KLHL41O60662 606 aa23.85■■□□□ 1.41
SMAD6-202ENST00000557916 VPS4BO75351 444 aa23.85■■□□□ 1.41
SMAD6-202ENST00000557916 DDCP20711 480 aa23.85■■□□□ 1.41
SMAD6-202ENST00000557916 IL23RQ5VWK5 629 aa23.85■■□□□ 1.41
SMAD6-202ENST00000557916 JMJD6Q6NYC1 403 aaPredicted RBP23.85■■□□□ 1.41
SMAD6-202ENST00000557916 C9orf43Q8TAL5 461 aaPredicted RBP23.85■■□□□ 1.41
SMAD6-202ENST00000557916 BRIX1Q8TDN6 353 aaKnown RBP23.85■■□□□ 1.41
SMAD6-202ENST00000557916 TSSK3Q96PN8 268 aa23.85■■□□□ 1.41
SMAD6-202ENST00000557916 ZNF552Q9H707 407 aaPredicted RBP23.85■■□□□ 1.41
SMAD6-202ENST00000557916 EHD3Q9NZN3 535 aa23.85■■□□□ 1.41
SMAD6-202ENST00000557916 BAIAP2L1Q9UHR4 511 aa23.85■■□□□ 1.41
SMAD6-202ENST00000557916 SFTPCP11686 197 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 CPMP14384 443 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 PORP16435 677 aaPredicted RBP23.84■■□□□ 1.41
SMAD6-202ENST00000557916 EMX2Q04743 252 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 MAD2L1Q13257 205 aaPredicted RBP23.84■■□□□ 1.41
SMAD6-202ENST00000557916 SMU1Q2TAY7 513 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 ZNF750Q32MQ0 723 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 MORN4Q8NDC4 146 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 PSMF1Q92530 271 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 KCNK13Q9HB14 408 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 MIEF1Q9NQG6 463 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 PPIEQ9UNP9 301 aaKnown RBP23.84■■□□□ 1.41
SMAD6-202ENST00000557916 EIF3LQ9Y262 564 aaKnown RBP23.84■■□□□ 1.41
SMAD6-202ENST00000557916 ZNF780BQ9Y6R6 833 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 DYRK3O43781 588 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 PRPS2P11908 318 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 CSNK2A2P19784 350 aaPredicted RBP23.84■■□□□ 1.41
SMAD6-202ENST00000557916 FEN1P39748 380 aaKnown RBP23.84■■□□□ 1.41
SMAD6-202ENST00000557916 ASMTP46597 345 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 PGDP52209 483 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 AGAP7PQ5VUJ5 663 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 TCTN3Q6NUS6 607 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 FAM180BQ6P0A1 224 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 DGAT2L6Q6ZPD8 337 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 RGS9BPQ6ZS82 235 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 FAM47EQ6ZV65 393 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 TICAM1Q8IUC6 712 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 LIX1Q8N485 282 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 SIRT6Q8N6T7 355 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 LSM14AQ8ND56 463 aaKnown RBP23.84■■□□□ 1.41
SMAD6-202ENST00000557916 CLHC1Q8NHS4 586 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 ELP5Q8TE02 316 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 RIT1Q92963 219 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 GFM2Q969S9 779 aaKnown RBP23.84■■□□□ 1.41
SMAD6-202ENST00000557916 NCLNQ969V3 563 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 EXOSC8Q96B26 276 aaKnown RBP23.84■■□□□ 1.41
SMAD6-202ENST00000557916 AGAP4Q96P64 663 aa23.84■■□□□ 1.41
SMAD6-202ENST00000557916 EXO1Q9UQ84 846 aaKnown RBP23.84■■□□□ 1.41
SMAD6-202ENST00000557916 SDHDO14521 159 aa23.83■■□□□ 1.4
SMAD6-202ENST00000557916 LRATO95237 230 aa23.83■■□□□ 1.4
SMAD6-202ENST00000557916 ALPPP05187 535 aa23.83■■□□□ 1.4
SMAD6-202ENST00000557916 GALNSP34059 522 aa23.83■■□□□ 1.4
SMAD6-202ENST00000557916 GPR143P51810 404 aa23.83■■□□□ 1.4
SMAD6-202ENST00000557916 VWA5B1Q5TIE3 1220 aa23.83■■□□□ 1.4
SMAD6-202ENST00000557916 KIF2BQ8N4N8 673 aa23.83■■□□□ 1.4
SMAD6-202ENST00000557916 APCDD1LQ8NCL9 501 aa23.83■■□□□ 1.4
SMAD6-202ENST00000557916 CNRIP1Q96F85 164 aaPredicted RBP23.83■■□□□ 1.4
SMAD6-202ENST00000557916 SMAD5Q99717 465 aaKnown RBP23.83■■□□□ 1.4
SMAD6-202ENST00000557916 OR8D2Q9GZM6 311 aa23.83■■□□□ 1.4
SMAD6-202ENST00000557916 ZNF71Q9NQZ8 489 aaPredicted RBP23.83■■□□□ 1.4
SMAD6-202ENST00000557916 GIMAP4Q9NUV9 329 aa23.83■■□□□ 1.4
SMAD6-202ENST00000557916 PTGFRNQ9P2B2 879 aa23.83■■□□□ 1.4
SMAD6-202ENST00000557916 TP53TG5Q9Y2B4 290 aa23.83■■□□□ 1.4
SMAD6-202ENST00000557916 A8MUI8 341 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 K7EM74 188 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 AKAP10O43572 662 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms