RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ZNF780BQ9Y6R6 833 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 CROCCQ5TZA2 2017 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 FGF17O60258 216 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 LDB3O75112 727 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 GBAP04062 536 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 IFNA16P05015 189 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 ATP1B1P05026 303 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 PORP16435 677 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-234ENST00000557703 MPIP34949 423 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 CLCN2P51788 898 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 PGDP52209 483 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 HNRNPFP52597 415 aaKnown RBP12.8□□□□□ -0.36
SHMT2-234ENST00000557703 FOXL2P58012 376 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 SLC26A5P58743 744 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 EEF1A2Q05639 463 aaKnown RBP12.8□□□□□ -0.36
SHMT2-234ENST00000557703 CEBPEQ15744 281 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 SPRED3Q2MJR0 410 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 BTBD16Q32M84 506 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 RFTN2Q52LD8 501 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-234ENST00000557703 C6orf136Q5SQH8 315 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 C6orf163Q5TEZ5 329 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 CES4AQ5XG92 561 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 FAM71E1Q6IPT2 247 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 OGFOD2Q6N063 350 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 SCIMPQ6UWF3 145 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 IGFL2Q6UWQ7 119 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 SLC5A8Q8N695 610 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 TMEM52Q8NDY8 209 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 NFAM1Q8NET5 270 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-234ENST00000557703 C9orf43Q8TAL5 461 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-234ENST00000557703 CKAP2Q8WWK9 683 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 TUBGCP3Q96CW5 907 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 VMP1Q96GC9 406 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 THOC3Q96J01 351 aaKnown RBP12.8□□□□□ -0.36
SHMT2-234ENST00000557703 ZNF354BQ96LW1 612 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 SIKE1Q9BRV8 207 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 RNF32Q9H0A6 362 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 ZNF552Q9H707 407 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-234ENST00000557703 TEX10Q9NXF1 929 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-234ENST00000557703 NOP53Q9NZM5 478 aaKnown RBP12.8□□□□□ -0.36
SHMT2-234ENST00000557703 ABI3Q9P2A4 366 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 COPS7AQ9UBW8 275 aa12.8□□□□□ -0.36
SHMT2-234ENST00000557703 EIF3LQ9Y262 564 aaKnown RBP12.8□□□□□ -0.36
SHMT2-234ENST00000557703 OR6C76A6NM76 312 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 TMEM233B4DJY2 109 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 PGRMC2O15173 223 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 OR10H2O60403 315 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 DPM1O60762 260 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 BCAS2O75934 225 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-234ENST00000557703 SEC24DO94855 1032 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-234ENST00000557703 CPMP14384 443 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 GPR143P51810 404 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 XKP51811 444 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 C21orf58P58505 322 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 ERVK-8P63133 956 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 COL9A2Q14055 689 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-234ENST00000557703 LACTB2Q53H82 288 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-234ENST00000557703 ISLR2Q6UXK2 745 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 ATG14Q6ZNE5 492 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 FNDC5Q8NAU1 212 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 OR5L2Q8NGL0 311 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 OR1N1Q8NGS0 311 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 OR2T11Q8NH01 316 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 AGR3Q8TD06 166 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 PTPMT1Q8WUK0 201 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-234ENST00000557703 ZBTB9Q96C00 473 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 ABHD17AQ96GS6 310 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 FBXL20Q96IG2 436 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 PRPF18Q99633 342 aaKnown RBP12.79□□□□□ -0.36
SHMT2-234ENST00000557703 TRIM55Q9BYV6 548 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 EPS8L2Q9H6S3 715 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 MIEF1Q9NQG6 463 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 PNO1Q9NRX1 252 aaKnown RBP12.79□□□□□ -0.36
SHMT2-234ENST00000557703 UTS2RQ9UKP6 389 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 CFL2Q9Y281 166 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 ATRXP46100 2492 aa12.79□□□□□ -0.36
SHMT2-234ENST00000557703 OR2W5A6NFC9 320 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 PEX11AO75192 247 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 SKAP2O75563 359 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-234ENST00000557703 IL3P08700 152 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 LBPP18428 481 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 TNNI3P19429 210 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 PRPS1L1P21108 318 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 RPL38P63173 70 aaKnown RBP12.78□□□□□ -0.36
SHMT2-234ENST00000557703 PSPHP78330 225 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 C2orf80Q0P641 193 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 MAP4K2Q12851 820 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 MEP1AQ16819 746 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 GALNTL6Q49A17 601 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 SPATA19Q7Z5L4 167 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 CLNKQ7Z7G1 428 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 LRRC25Q8N386 305 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-234ENST00000557703 APCDD1LQ8NCL9 501 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 FDCSPQ8NFU4 85 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 OR7G1Q8NGA0 311 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 RIT1Q92963 219 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 SLC35C2Q9NQQ7 365 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 ATAD3AQ9NVI7 634 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 ENTPD4Q9Y227 616 aa12.78□□□□□ -0.36
SHMT2-234ENST00000557703 C17orf105B2RV13 164 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms