RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 GBX1Q14549 363 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 KCNJ11Q14654 390 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 LIAT1Q6ZQX7 453 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 ATG4DQ86TL0 474 aaPredicted RBP8.46□□□□□ -1.06
NEDD1-211ENST00000557454 SNX31Q8N9S9 440 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 FAM47BQ8NA70 645 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 CTHRC1Q96CG8 243 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 BTBD9Q96Q07 612 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 SOX7Q9BT81 388 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 RBM4Q9BWF3 364 aaKnown RBP8.46□□□□□ -1.06
NEDD1-211ENST00000557454 ACTR6Q9GZN1 396 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 METTL17Q9H7H0 456 aaPredicted RBP8.46□□□□□ -1.06
NEDD1-211ENST00000557454 CCDC177Q9NQR7 707 aaPredicted RBP8.46□□□□□ -1.06
NEDD1-211ENST00000557454 CTTNBP2NLQ9P2B4 639 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 C17orf105B2RV13 164 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 GNB5O14775 395 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 OR1F1O43749 312 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 CD8BP10966 210 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 ZFP36P26651 326 aaKnown RBP8.45□□□□□ -1.06
NEDD1-211ENST00000557454 ATP5DP30049 168 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 GCKP35557 465 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 STARP49675 285 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 HSD17B7P56937 341 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 RGS1Q08116 209 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 RPS6KA1Q15418 735 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 CYP1B1Q16678 543 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 KBTBD12Q3ZCT8 623 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 FASTKD1Q53R41 847 aaKnown RBP8.45□□□□□ -1.06
NEDD1-211ENST00000557454 ACSBG2Q5FVE4 666 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 TBCELQ5QJ74 424 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 NCMAPQ5T1S8 102 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 OR2A2Q6IF42 318 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 ENPP6Q6UWR7 440 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 DNAJC14Q6Y2X3 702 aaPredicted RBP8.45□□□□□ -1.06
NEDD1-211ENST00000557454 STAC2Q6ZMT1 411 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 RINLQ6ZS11 566 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 C9orf40Q8IXQ3 194 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 OR4L1Q8NH43 312 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 NUBPLQ8TB37 319 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 P3H4Q92791 437 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 MRPL24Q96A35 216 aaKnown RBP8.45□□□□□ -1.06
NEDD1-211ENST00000557454 MRFAP1L1Q96HT8 127 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 TACO1Q9BSH4 297 aaKnown RBP8.45□□□□□ -1.06
NEDD1-211ENST00000557454 TRIM2Q9C040 744 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 GRIP2Q9C0E4 1043 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 P2RY12Q9H244 342 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 CLK4Q9HAZ1 481 aaKnown RBP8.45□□□□□ -1.06
NEDD1-211ENST00000557454 PLA2G2EQ9NZK7 142 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 MARCH4Q9P2E8 410 aaPredicted RBP8.45□□□□□ -1.06
NEDD1-211ENST00000557454 COPS7AQ9UBW8 275 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 FETUBQ9UGM5 382 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 TMEFF2Q9UIK5 374 aaPredicted RBP8.45□□□□□ -1.06
NEDD1-211ENST00000557454 PROCRQ9UNN8 238 aa8.45□□□□□ -1.06
NEDD1-211ENST00000557454 IGHV4-61A0A0C4DH41 118 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 CTAGE15A4D2H0 777 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 ANKRD33BA6NCL7 494 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 SLC22A20A6NK97 555 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 HACD1B0YJ81 288 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 EMC8O43402 210 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 ETHE1O95571 254 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 SERPINB3P29508 390 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 PPARGP37231 505 aaPredicted RBP8.44□□□□□ -1.06
NEDD1-211ENST00000557454 CDKN2BP42772 138 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 LHX2P50458 406 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 FUT7Q11130 342 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 TFDP2Q14188 446 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 NTRK2Q16620 822 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 KLHL38Q2WGJ6 581 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 BBS9Q3SYG4 887 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 ODF2Q5BJF6 829 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 CTSL3PQ5NE16 218 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 CTAGE6Q86UF2 777 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 C17orf64Q86WR6 236 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 TRIM42Q8IWZ5 723 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 DND1Q8IYX4 353 aaKnown RBP8.44□□□□□ -1.06
NEDD1-211ENST00000557454 NUP43Q8NFH3 380 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 NT5CQ8TCD5 201 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 ZNF721Q8TF20 911 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 ZNF418Q8TF45 676 aaPredicted RBP8.44□□□□□ -1.06
NEDD1-211ENST00000557454 KLHL31Q9H511 634 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 FAIMQ9NVQ4 179 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 TEX10Q9NXF1 929 aaPredicted RBP8.44□□□□□ -1.06
NEDD1-211ENST00000557454 AMFRQ9UKV5 643 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 RNF112Q9ULX5 631 aa8.44□□□□□ -1.06
NEDD1-211ENST00000557454 H7C0C1 242 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 NIPSNAP2O75323 286 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 LY6HO94772 140 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 SNX4O95219 450 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 CSF3P09919 207 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 ARAFP10398 606 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 TNNT1P13805 278 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 TNNI3P19429 210 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 CTNNA2P26232 953 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 MSH2P43246 934 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 ATP5OP48047 213 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 FBXW4P57775 412 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 C21orf58P58505 322 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 HILS1P60008 231 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 RUNX2Q13950 521 aa8.43□□□□□ -1.06
NEDD1-211ENST00000557454 RAB35Q15286 201 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms