RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ATG4BQ9Y4P1 393 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 A0A0A6YYD5 115 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 LRRC14BA6NHZ5 514 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 ZNF354AO60765 605 aaPredicted RBP13.1□□□□□ -0.31
SNX6-210ENST00000557341 PRKRAO75569 313 aaKnown RBP13.1□□□□□ -0.31
SNX6-210ENST00000557341 GLSO94925 669 aaPredicted RBP13.1□□□□□ -0.31
SNX6-210ENST00000557341 SIX3O95343 332 aaPredicted RBP13.1□□□□□ -0.31
SNX6-210ENST00000557341 IGKV3-11P04433 115 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 NR2F6P10588 404 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 SSTR2P30874 369 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 ARL1P40616 181 aaPredicted RBP13.1□□□□□ -0.31
SNX6-210ENST00000557341 KIR3DL1P43629 444 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 ASPHQ12797 758 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 CUL3Q13618 768 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 SPRED3Q2MJR0 410 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 CYP20A1Q6UW02 462 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 TAOK1Q7L7X3 1001 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 NUDT13Q86X67 352 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 ASB5Q8WWX0 329 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 LURAP1Q96LR2 239 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 CNPPD1Q9BV87 410 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 ZNF717Q9BY31 904 aaPredicted RBP13.1□□□□□ -0.31
SNX6-210ENST00000557341 VPS11Q9H270 941 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 WDR41Q9HAD4 459 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 IL1RL2Q9HB29 575 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 NINJ2Q9NZG7 142 aa13.1□□□□□ -0.31
SNX6-210ENST00000557341 OR14I1A6ND48 311 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 PROM1O43490 865 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 OR10H2O60403 315 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 EEDO75530 441 aaKnown RBP13.09□□□□□ -0.31
SNX6-210ENST00000557341 CLDN9O95484 217 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 INHBAP08476 426 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 CCL3P10147 92 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 CHRNB4P30926 498 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 MAGEA5P43359 124 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 DNASE1L1P49184 302 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 NR0B1P51843 470 aaKnown RBP13.09□□□□□ -0.31
SNX6-210ENST00000557341 HERVK_113P63132 956 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 ERVK-8P63133 956 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 TBL3Q12788 808 aaKnown RBP13.09□□□□□ -0.31
SNX6-210ENST00000557341 PIGGQ5H8A4 983 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 MRM1Q6IN84 353 aaKnown RBP13.09□□□□□ -0.31
SNX6-210ENST00000557341 RNF111Q6ZNA4 994 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 DGAT2L6Q6ZPD8 337 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 SLC29A4Q7RTT9 530 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 RELL1Q8IUW5 271 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 DND1Q8IYX4 353 aaKnown RBP13.09□□□□□ -0.31
SNX6-210ENST00000557341 SLC15A4Q8N697 577 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 TMEM251Q8N6I4 163 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 PTGR2Q8N8N7 351 aaPredicted RBP13.09□□□□□ -0.31
SNX6-210ENST00000557341 L3MBTL4Q8NA19 623 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 OR5M3Q8NGP4 307 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 WDR20Q8TBZ3 569 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 CHTF18Q8WVB6 975 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 RND1Q92730 232 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 PPWD1Q96BP3 646 aaKnown RBP13.09□□□□□ -0.31
SNX6-210ENST00000557341 SPACA9Q96E40 222 aaPredicted RBP13.09□□□□□ -0.31
SNX6-210ENST00000557341 C16orf45Q96MC5 204 aaPredicted RBP13.09□□□□□ -0.31
SNX6-210ENST00000557341 GPR78Q96P69 363 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 GAL3ST4Q96RP7 486 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 SMC6Q96SB8 1091 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 TEP1Q99973 2627 aaKnown RBP13.09□□□□□ -0.31
SNX6-210ENST00000557341 SPOCK3Q9BQ16 436 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 ERVK-6Q9BXR3 956 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 ENKD1Q9H0I2 346 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 CDC42EP4Q9H3Q1 356 aaKnown RBP13.09□□□□□ -0.31
SNX6-210ENST00000557341 DDX31Q9H8H2 851 aaKnown RBP13.09□□□□□ -0.31
SNX6-210ENST00000557341 RYDENQ9NUL5 291 aaKnown RBP13.09□□□□□ -0.31
SNX6-210ENST00000557341 TMCO1Q9UM00 188 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 ERVK-19Q9WJR5 959 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 HRH3Q9Y5N1 445 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 LIPGQ9Y5X9 500 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 IKBKGQ9Y6K9 419 aa13.09□□□□□ -0.31
SNX6-210ENST00000557341 AKAP9Q99996 3911 aa13.08□□□□□ -0.31
SNX6-210ENST00000557341 IQANK1A0A1B0GTG1 560 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 FIGNL2A6NMB9 653 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 NPIPA2E9PIF3 369 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 NPIPA3F8WFD2 350 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 HRKO00198 91 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 FOXE1O00358 373 aaPredicted RBP13.08□□□□□ -0.32
SNX6-210ENST00000557341 BCKDKO14874 412 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 TMPRSS11DO60235 418 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 URI1O94763 535 aaPredicted RBP13.08□□□□□ -0.32
SNX6-210ENST00000557341 SEMA3DO95025 777 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 ACSL3O95573 720 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 GPR75O95800 540 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 AIFM1O95831 613 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 IGHG3P01860 377 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 FAM58BPP0C7Q3 252 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 BSGP35613 385 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 CCNG1P51959 295 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 FOXO1Q12778 655 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 WHAMMP3Q1A5X7 153 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 HYAL4Q2M3T9 481 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 ZNF791Q3KP31 576 aaPredicted RBP13.08□□□□□ -0.32
SNX6-210ENST00000557341 EMC4Q5J8M3 183 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 UBAP2Q5T6F2 1119 aaKnown RBP13.08□□□□□ -0.32
SNX6-210ENST00000557341 OR52E8Q6IFG1 317 aa13.08□□□□□ -0.32
SNX6-210ENST00000557341 MEX3BQ6ZN04 569 aaKnown RBP13.08□□□□□ -0.32
SNX6-210ENST00000557341 TRILQ7L0X0 811 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms