RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 PLPP1O14494 284 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 ATP6AP2O75787 350 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 GPR75O95800 540 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 ALOX15P16050 662 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-213ENST00000557262 IGFBP2P18065 325 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 ACVR2AP27037 513 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 BUD31P41223 144 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-213ENST00000557262 ALDH18A1P54886 795 aaKnown RBP14.67□□□□□ -0.06
TUBB3-213ENST00000557262 RPS13P62277 151 aaKnown RBP14.67□□□□□ -0.06
TUBB3-213ENST00000557262 PHEXP78562 749 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 IRF9Q00978 393 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 TNFRSF17Q02223 184 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 TFF3Q07654 80 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 TBL3Q12788 808 aaKnown RBP14.67□□□□□ -0.06
TUBB3-213ENST00000557262 SETDB1Q15047 1291 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 ACAP2Q15057 778 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 PFKFB4Q16877 469 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 MROH9Q5TGP6 573 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 ZNF585AQ6P3V2 769 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 DGAT2L6Q6ZPD8 337 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 C9orf40Q8IXQ3 194 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 ST13P4Q8IZP2 240 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-213ENST00000557262 CENPLQ8N0S6 344 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-213ENST00000557262 OR10Q1Q8NGQ4 319 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 REPS1Q96D71 796 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 FBXL20Q96IG2 436 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 PELOQ9BRX2 385 aaKnown RBP14.67□□□□□ -0.06
TUBB3-213ENST00000557262 LDAHQ9H6V9 325 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 ACTR8Q9H981 624 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 SEMA4BQ9NPR2 832 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-213ENST00000557262 RYDENQ9NUL5 291 aaKnown RBP14.67□□□□□ -0.06
TUBB3-213ENST00000557262 PSD3Q9NYI0 1048 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 LIPGQ9Y5X9 500 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.67□□□□□ -0.06
TUBB3-213ENST00000557262 ZNF407Q9C0G0 2248 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 CCDC168Q8NDH2 2452 aa14.67□□□□□ -0.06
TUBB3-213ENST00000557262 F8P00451 2351 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 EML6Q6ZMW3 1958 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 IQANK1A0A1B0GTG1 560 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 FIGNL2A6NMB9 653 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 FAM90A27PA6NNH2 459 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 HRKO00198 91 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 AQP7O14520 342 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 KLK8O60259 260 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 UGDHO60701 494 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 KLHL2O95198 593 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 NADKO95544 446 aaPredicted RBP14.66□□□□□ -0.06
TUBB3-213ENST00000557262 GFAPP14136 432 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 BSGP35613 385 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 PIGAP37287 484 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 MAN2A2P49641 1150 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 HNRNPH2P55795 449 aaKnown RBP14.66□□□□□ -0.06
TUBB3-213ENST00000557262 CUL3Q13618 768 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 PCBP2Q15366 365 aaKnown RBP eCLIP14.66□□□□□ -0.062e-6■■□□□ 13.3
TUBB3-213ENST00000557262 MRM1Q6IN84 353 aaKnown RBP14.66□□□□□ -0.06
TUBB3-213ENST00000557262 LYPD8Q6UX82 237 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 DND1Q8IYX4 353 aaKnown RBP14.66□□□□□ -0.06
TUBB3-213ENST00000557262 PAQR8Q8TEZ7 354 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 SARAFQ96BY9 339 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 MRRFQ96E11 262 aaKnown RBP14.66□□□□□ -0.06
TUBB3-213ENST00000557262 TTYH2Q9BSA4 534 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 DDX31Q9H8H2 851 aaKnown RBP14.66□□□□□ -0.06
TUBB3-213ENST00000557262 IPPKQ9H8X2 491 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 SH2D2AQ9NP31 389 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 NPDC1Q9NQX5 325 aaPredicted RBP14.66□□□□□ -0.06
TUBB3-213ENST00000557262 SNX15Q9NRS6 342 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 LYARQ9NX58 379 aaKnown RBP14.66□□□□□ -0.06
TUBB3-213ENST00000557262 ACAD8Q9UKU7 415 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 ASB4Q9Y574 426 aa14.66□□□□□ -0.06
TUBB3-213ENST00000557262 TNPO3Q9Y5L0 923 aaKnown RBP14.66□□□□□ -0.06
TUBB3-213ENST00000557262 DNAJC13O75165 2243 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 HMX2A2RU54 273 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 LRRC14BA6NHZ5 514 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 WASHC1A8K0Z3 465 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 HCN1O60741 890 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 HOXD4P09016 255 aaPredicted RBP14.65□□□□□ -0.06
TUBB3-213ENST00000557262 CELA3AP09093 270 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 MSX1P28360 303 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 SERPINB3P29508 390 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 GALNSP34059 522 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 ZFP36L2P47974 494 aaKnown RBP14.65□□□□□ -0.06
TUBB3-213ENST00000557262 ETF1P62495 437 aaKnown RBP14.65□□□□□ -0.06
TUBB3-213ENST00000557262 HERVK_113P63132 956 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 ERVK-8P63133 956 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 GTF2H2Q13888 395 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 ZNF267Q14586 743 aaPredicted RBP14.65□□□□□ -0.06
TUBB3-213ENST00000557262 CPSF6Q16630 551 aaKnown RBP eCLIP14.65□□□□□ -0.06
TUBB3-213ENST00000557262 SPRED3Q2MJR0 410 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 WLSQ5T9L3 541 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 GTF2H2CQ6P1K8 395 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 METTL2BQ6P1Q9 378 aaKnown RBP14.65□□□□□ -0.06
TUBB3-213ENST00000557262 KLC3Q6P597 504 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 CYP20A1Q6UW02 462 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 B3GNT6Q6ZMB0 384 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 SLC29A4Q7RTT9 530 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 DMRTC2Q8IXT2 367 aaPredicted RBP14.65□□□□□ -0.06
TUBB3-213ENST00000557262 L3MBTL4Q8NA19 623 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 DOK4Q8TEW6 326 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 RIT1Q92963 219 aa14.65□□□□□ -0.06
TUBB3-213ENST00000557262 SPACA9Q96E40 222 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms