RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 WDR34Q96EX3 536 aa9.95□□□□□ -0.82
HNRNPC-230ENST00000557201 VMP1Q96GC9 406 aa9.95□□□□□ -0.82
HNRNPC-230ENST00000557201 ATP6V1G3Q96LB4 118 aa9.95□□□□□ -0.82
HNRNPC-230ENST00000557201 QRFPRQ96P65 431 aa9.95□□□□□ -0.82
HNRNPC-230ENST00000557201 NPLQ9BXD5 320 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-230ENST00000557201 ERVK-6Q9BXR3 956 aa9.95□□□□□ -0.82
HNRNPC-230ENST00000557201 UCK2Q9BZX2 261 aa9.95□□□□□ -0.82
HNRNPC-230ENST00000557201 RHBGQ9H310 441 aa9.95□□□□□ -0.82
HNRNPC-230ENST00000557201 ACBD3Q9H3P7 528 aa9.95□□□□□ -0.82
HNRNPC-230ENST00000557201 OXSMQ9NWU1 459 aa9.95□□□□□ -0.82
HNRNPC-230ENST00000557201 OPTCQ9UBM4 332 aa9.95□□□□□ -0.82
HNRNPC-230ENST00000557201 MID2Q9UJV3 735 aa9.95□□□□□ -0.82
HNRNPC-230ENST00000557201 FBXW2Q9UKT8 454 aa9.95□□□□□ -0.82
HNRNPC-230ENST00000557201 YARS2Q9Y2Z4 477 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-230ENST00000557201 A0A0G2JMM0 328 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 A0A1W2PPB8 328 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 A0A1W2PRS3 328 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 NKX2-6A6NCS4 301 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 LRIT2A6NDA9 550 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 KIR3DP1A8MWS1 328 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 CYR61O00622 381 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 DYNC1I1O14576 645 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 CCNT2O60583 730 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 PDE9AO76083 593 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 GLSO94925 669 aaPredicted RBP9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 ZWINTO95229 277 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 SIX3O95343 332 aaPredicted RBP9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 RPS17P08708 135 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 HOXD4P09016 255 aaPredicted RBP9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 MYL2P10916 166 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 SSR4P51571 173 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 HSD17B7P56937 341 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 DNAJB13P59910 316 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 MAGOHP61326 146 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 NAA20P61599 178 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 BTN3A2P78410 334 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 MPP2Q14168 576 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 RBBP5Q15291 538 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 TBCCQ15814 346 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 FBXO48Q5FWF7 155 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 SLCO4C1Q6ZQN7 724 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 VN1R5Q7Z5H4 357 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 GPALPP1Q8IXQ4 340 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 TMEM156Q8N614 296 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 GOLGA6L1Q8N7Z2 621 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 PSD4Q8NDX1 1056 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 RND1Q92730 232 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 GAL3ST3Q96A11 431 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 ARL8AQ96BM9 186 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 ZBTB9Q96C00 473 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 FAM111AQ96PZ2 611 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 PITHD1Q9GZP4 211 aaPredicted RBP9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 C12orf65Q9H3J6 166 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 ADAP2Q9NPF8 381 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 TIMMDC1Q9NPL8 285 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 KCMF1Q9P0J7 381 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 SLC17A7Q9P2U7 560 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 PCTPQ9UKL6 214 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 DYRK1BQ9Y463 629 aa9.94□□□□□ -0.82
HNRNPC-230ENST00000557201 A0A0G2JN53 185 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 HMGB1P1B2RPK0 211 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 CDC40O60508 579 aaKnown RBP eCLIP9.93□□□□□ -0.821e-6■■■■■ 29.9
HNRNPC-230ENST00000557201 UGDHO60701 494 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 PRAMEF4O60810 478 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 OR2J2O76002 312 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 ZFAND5O76080 213 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 OR6B1O95007 311 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 IGHG3P01860 377 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 DHRS4L1P0CG22 281 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 C1GALT1C1LP0DN25 315 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 RAB38P57729 211 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 NUP107P57740 925 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 STXBP1P61764 594 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 PMPCAQ10713 525 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 GTF2H2Q13888 395 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 GXYLT1Q4G148 440 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 ZNF678Q5SXM1 525 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 PRAMEF9Q5VWM5 478 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 GTF2H2CQ6P1K8 395 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 CCDC71Q8IV32 467 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 ZNF595Q8IYB9 648 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 TEX9Q8N6V9 391 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 SNX31Q8N9S9 440 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 OR2M7Q8NG81 312 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 ZNF483Q8TF39 744 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 SEC16BQ96JE7 1060 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 TMEM237Q96Q45 408 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 RASL10BQ96S79 203 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 KCNK17Q96T54 332 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 DEFB127Q9H1M4 99 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 NT5DC2Q9H857 520 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 LIN28AQ9H9Z2 209 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 PRTFDC1Q9NRG1 225 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 PNO1Q9NRX1 252 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 MYOTQ9UBF9 498 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 NF1P21359 2839 aa9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 PHF3Q92576 2039 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-230ENST00000557201 A0A1B0GVC2 190 aa9.92□□□□□ -0.82
HNRNPC-230ENST00000557201 TMEM120BA0PK00 339 aa9.92□□□□□ -0.82
HNRNPC-230ENST00000557201 LRRC14BA6NHZ5 514 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms