RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 HKDC1Q2TB90 917 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 BEAN1Q3B7T3 259 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 HSP90AA4PQ58FG1 418 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 CT47A1Q5JQC4 288 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-223ENST00000557076 FAM182AQ5T1J6 154 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 MFSD4BQ5TF39 518 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 TTC23LQ6PF05 361 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 DRICH1Q6PGQ1 229 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-223ENST00000557076 ESPNLQ6ZVH7 1005 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 BZW1Q7L1Q6 419 aaKnown RBP4.33□□□□□ -1.72
SCFD1-223ENST00000557076 SERPINA9Q86WD7 417 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 VSIG1Q86XK7 387 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 DCUN1D3Q8IWE4 304 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 GPALPP1Q8IXQ4 340 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 PIANPQ8IYJ0 282 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 SLC22A15Q8IZD6 547 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 FBXW8Q8N3Y1 598 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 LIX1Q8N485 282 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 FAM109AQ8N4B1 249 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 KIF2BQ8N4N8 673 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 TMEM156Q8N614 296 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 PSD4Q8NDX1 1056 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 NFAM1Q8NET5 270 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-223ENST00000557076 TNIP2Q8NFZ5 429 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 OR2M7Q8NG81 312 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 SGMS2Q8NHU3 365 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 MCOLN3Q8TDD5 553 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 ASZ1Q8WWH4 475 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 IGFBPL1Q8WX77 278 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 CAVIN3Q969G5 261 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 RERGQ96A58 199 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-223ENST00000557076 RAD51AP1Q96B01 352 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 OXNAD1Q96HP4 312 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-223ENST00000557076 SPATA13Q96N96 652 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 OLFM3Q96PB7 478 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 IL17FQ96PD4 163 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 VAT1Q99536 393 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 FAM173AQ9BQD7 235 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 DPH7Q9BTV6 452 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 MAK16Q9BXY0 300 aaKnown RBP4.33□□□□□ -1.72
SCFD1-223ENST00000557076 DEFB126Q9BYW3 111 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 REG4Q9BYZ8 158 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 TTTY12Q9BZ98 90 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 ISCUQ9H1K1 167 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 LDAHQ9H6V9 325 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 ZMAT4Q9H898 229 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 IL1RL2Q9HB29 575 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 SPTLC3Q9NUV7 552 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 OXSMQ9NWU1 459 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 TMEM160Q9NX00 188 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 UTP6Q9NYH9 597 aaKnown RBP4.33□□□□□ -1.72
SCFD1-223ENST00000557076 SMARCAL1Q9NZC9 954 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 MYO1AQ9UBC5 1043 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 DKK2Q9UBU2 259 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 NDRG3Q9UGV2 375 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 MYO6Q9UM54 1294 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 YARS2Q9Y2Z4 477 aaKnown RBP4.33□□□□□ -1.72
SCFD1-223ENST00000557076 HEY1Q9Y5J3 304 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 PRSS21Q9Y6M0 314 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 SNRNP200O75643 2136 aaKnown RBP4.33□□□□□ -1.72
SCFD1-223ENST00000557076 FREM1Q5H8C1 2179 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 KCNE1BA0A087WTH5 132 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 TRGV5A0A0B4J1U4 118 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 A0A1W2PPV9 198 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 PINLYPA6NC86 204 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 FAM166BA8MTA8 275 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 F8W8V4 182 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 CTIFO43310 598 aaKnown RBP4.32□□□□□ -1.72
SCFD1-223ENST00000557076 AGTP01019 485 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 OR56A5P0C7T3 313 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 EZRP15311 586 aaKnown RBP4.32□□□□□ -1.72
SCFD1-223ENST00000557076 EGR1P18146 543 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 CTSSP25774 331 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 MGAT1P26572 445 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 CMPK1P30085 196 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 SSR1P43307 286 aaKnown RBP4.32□□□□□ -1.72
SCFD1-223ENST00000557076 ZNF136P52737 540 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 ZNF140P52738 457 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-223ENST00000557076 TAP2Q03519 686 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 PRDX1Q06830 199 aaKnown RBP4.32□□□□□ -1.72
SCFD1-223ENST00000557076 WASHC5Q12768 1159 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 ITIH4Q14624 930 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 SIX1Q15475 284 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-223ENST00000557076 ETFDHQ16134 617 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 PDLIM3Q53GG5 364 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-223ENST00000557076 C10orf62Q5T681 223 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-223ENST00000557076 UBAP2Q5T6F2 1119 aaKnown RBP4.32□□□□□ -1.72
SCFD1-223ENST00000557076 SLC9A4Q6AI14 798 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 ZNF425Q6IV72 752 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 PACS1Q6VY07 963 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 PLEKHM3Q6ZWE6 761 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 TAS2R42Q7RTR8 314 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 OTOAQ7RTW8 1153 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 PID1Q7Z2X4 250 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 ZNF571Q7Z3V5 609 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-223ENST00000557076 HSCBQ8IWL3 235 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 CYP4Z2PQ8N1L4 340 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 RAB42Q8N4Z0 105 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 TMEM251Q8N6I4 163 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 NAXEQ8NCW5 288 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms