RNA–Protein interactions for RNA: ENST00000556565.5

TUBB3-212, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-212ENST00000556565 CBX6O95503 412 aa16.35■□□□□ 0.21
TUBB3-212ENST00000556565 TUBBP07437 444 aa16.35■□□□□ 0.21
TUBB3-212ENST00000556565 CD46P15529 392 aa16.35■□□□□ 0.21
TUBB3-212ENST00000556565 CYB561P49447 251 aa16.35■□□□□ 0.21
TUBB3-212ENST00000556565 HLCSP50747 726 aa16.35■□□□□ 0.21
TUBB3-212ENST00000556565 FOXA1P55317 472 aa16.35■□□□□ 0.21
TUBB3-212ENST00000556565 ZNF844Q08AG5 666 aa16.35■□□□□ 0.21
TUBB3-212ENST00000556565 C16orf47Q6ZP98 133 aaPredicted RBP16.35■□□□□ 0.21
TUBB3-212ENST00000556565 DGAT2L6Q6ZPD8 337 aa16.35■□□□□ 0.21
TUBB3-212ENST00000556565 HORMAD2Q8N7B1 307 aa16.35■□□□□ 0.21
TUBB3-212ENST00000556565 ST6GALNAC3Q8NDV1 305 aa16.35■□□□□ 0.21
TUBB3-212ENST00000556565 ZNF721Q8TF20 911 aa16.35■□□□□ 0.21
TUBB3-212ENST00000556565 SREK1Q8WXA9 508 aaKnown RBP16.35■□□□□ 0.21
TUBB3-212ENST00000556565 PPWD1Q96BP3 646 aaKnown RBP16.35■□□□□ 0.21
TUBB3-212ENST00000556565 SCMH1Q96GD3 660 aa16.35■□□□□ 0.21
TUBB3-212ENST00000556565 RBM18Q96H35 190 aaKnown RBP16.35■□□□□ 0.21
TUBB3-212ENST00000556565 FBXL20Q96IG2 436 aa16.35■□□□□ 0.21
TUBB3-212ENST00000556565 TRIM45Q9H8W5 580 aaPredicted RBP16.35■□□□□ 0.21
TUBB3-212ENST00000556565 FLNBO75369 2602 aaKnown RBP16.34■□□□□ 0.21
TUBB3-212ENST00000556565 A0A1W2PS29 197 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 ANKUB1A6NFN9 424 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 HRKO00198 91 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 DYRK3O43781 588 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 GUCY1B2O75343 617 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 SPAG7O75391 227 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 SLC25A12O75746 678 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 IGKV3-11P04433 115 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 SSR4P51571 173 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 PMP22Q01453 160 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 HMGCS1Q01581 520 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 SRSF1Q07955 248 aaKnown RBP eCLIP16.34■□□□□ 0.21
TUBB3-212ENST00000556565 SPRED3Q2MJR0 410 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 KRT71Q3SY84 523 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 ZNF324BQ6AW86 544 aaPredicted RBP16.34■□□□□ 0.21
TUBB3-212ENST00000556565 SCIMPQ6UWF3 145 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 ZNF227Q86WZ6 799 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 TMEM178AQ8NBL3 297 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 OR8K3Q8NH51 312 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 CHTF18Q8WVB6 975 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 SENP5Q96HI0 755 aaPredicted RBP16.34■□□□□ 0.21
TUBB3-212ENST00000556565 ART5Q96L15 291 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 FAM111AQ96PZ2 611 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 SMC6Q96SB8 1091 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 LIN28AQ9H9Z2 209 aaKnown RBP16.34■□□□□ 0.21
TUBB3-212ENST00000556565 TNFRSF12AQ9NP84 129 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 SLC17A7Q9P2U7 560 aa16.34■□□□□ 0.21
TUBB3-212ENST00000556565 ESPL1Q14674 2120 aa16.33■□□□□ 0.21
TUBB3-212ENST00000556565 SERTM1A2A2V5 107 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 CRCPO75575 148 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 OR2J2O76002 312 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 SLC35E2P0CK97 266 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 EDN3P14138 238 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 HK2P52789 917 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 RNF4P78317 190 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 EIF2S3LQ2VIR3 472 aaKnown RBP16.33■□□□□ 0.2
TUBB3-212ENST00000556565 SLC25A25Q6KCM7 469 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 SLC48A1Q6P1K1 146 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 MMP21Q8N119 569 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 FAM26EQ8N5C1 309 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 DOK4Q8TEW6 326 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 NR4A3Q92570 626 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 TM4SF18Q96CE8 201 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 CNPPD1Q9BV87 410 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 GATA5Q9BWX5 397 aaPredicted RBP16.33■□□□□ 0.2
TUBB3-212ENST00000556565 SHCBP1LQ9BZQ2 653 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 MYOTQ9UBF9 498 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 MCM8Q9UJA3 840 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 YARS2Q9Y2Z4 477 aaKnown RBP16.33■□□□□ 0.2
TUBB3-212ENST00000556565 PCDHA9Q9Y5H5 950 aa16.33■□□□□ 0.2
TUBB3-212ENST00000556565 C1orf226A1L170 272 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 WWP2O00308 870 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 PCDH7O60245 1069 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 NME2P1O60361 137 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 TRIM13O60858 407 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 CRYABP02511 175 aaKnown RBP16.32■□□□□ 0.2
TUBB3-212ENST00000556565 SP1P08047 785 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 CREB1P16220 341 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 NME2P22392 152 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 PIK3R1P27986 724 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 GALNSP34059 522 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 TDGF1P3P51864 188 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 TRA2BP62995 288 aaKnown RBP16.32■□□□□ 0.2
TUBB3-212ENST00000556565 ERVK-8P63133 956 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 RAE1P78406 368 aaKnown RBP16.32■□□□□ 0.2
TUBB3-212ENST00000556565 ACSM2AQ08AH3 577 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 ASPHQ12797 758 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 PTPN13Q12923 2485 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 ELOAQ14241 798 aaKnown RBP16.32■□□□□ 0.2
TUBB3-212ENST00000556565 SPIN4Q56A73 249 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 ACSM2BQ68CK6 577 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 GALNTL5Q7Z4T8 443 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 C9orf40Q8IXQ3 194 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 CYP4Z2PQ8N1L4 340 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 TMEM156Q8N614 296 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 OR4K14Q8NGD5 310 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 OR5L2Q8NGL0 311 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 DNAJB8Q8NHS0 232 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 TCP10LQ8TDR4 215 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 RIT1Q92963 219 aa16.32■□□□□ 0.2
TUBB3-212ENST00000556565 TMEM125Q96AQ2 219 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms