RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 ZCCHC3Q9NUD5 404 aaKnown RBP17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 EHD3Q9NZN3 535 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 ANKMY1Q9P2S6 941 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 WNT16Q9UBV4 365 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 PILRAQ9UKJ1 303 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 ANGPT4Q9Y264 503 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 H0YGG7 62 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 GUCY1B2O75343 617 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 DCNP07585 359 aaKnown RBP17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 OR12D1P0DN82 309 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 ARF3P61204 181 aaPredicted RBP17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 IQCCQ4KMZ1 466 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 LIN52Q52LA3 116 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 SLC48A1Q6P1K1 146 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 TMEM107Q6UX40 140 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 PRSS41Q7RTY9 318 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 TSEN54Q7Z6J9 526 aaKnown RBP17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 SUN3Q8TAQ9 357 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 NT5CQ8TCD5 201 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 ZFPM2Q8WW38 1151 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 TM4SF19Q96DZ7 209 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 SHDQ96IW2 340 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 HSPA12BQ96MM6 686 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 GUCD1Q96NT3 240 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 ZFYVE21Q9BQ24 234 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 MRPS26Q9BYN8 205 aaKnown RBP17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 TBC1D17Q9HA65 648 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 CD320Q9NPF0 282 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 PDP1Q9P0J1 537 aaPredicted RBP17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 TRPC4Q9UBN4 977 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 CES1P1Q9UKY3 287 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 ENTPD4Q9Y227 616 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 SH3GLB1Q9Y371 365 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 TESMINQ9Y4I5 508 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 SDK1Q7Z5N4 2213 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 PRAMEF25A6NGN4 478 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 C5orf58C9J3I9 102 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 HMGN4O00479 90 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 HCRTR1O43613 425 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 OR6B1O95007 311 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 HPRP00739 348 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 PPM1FP49593 454 aaPredicted RBP17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 METTL25Q8N6Q8 603 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 XAGE5Q8WWM1 108 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 RERGQ96A58 199 aaPredicted RBP17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 TMEM19Q96HH6 336 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 FAM118AQ9NWS6 357 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 TMEFF2Q9UIK5 374 aaPredicted RBP17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 DOLKQ9UPQ8 538 aa17.3■□□□□ 0.36
SDR39U1-220ENST00000556548 ABCA7Q8IZY2 2146 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 TLR4O00206 839 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 PFDN1O60925 122 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 SDC3O75056 442 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 HOXB6P17509 224 aaKnown RBP17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 RRM2P31350 389 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 NUDT1P36639 197 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 ARHGDIAP52565 204 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 KCNAB2Q13303 367 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 DEFB110Q30KQ9 67 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 REEP3Q6NUK4 255 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 USP51Q70EK9 711 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 PATL1Q86TB9 770 aaKnown RBP17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 DCP2Q8IU60 420 aaKnown RBP17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 OR4N5Q8IXE1 308 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 OR52J3Q8NH60 311 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 BAHD1Q8TBE0 780 aaPredicted RBP17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 ZNF764Q96H86 408 aaPredicted RBP17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 TWSG1Q9GZX9 223 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 OR51I1Q9H343 314 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 REEP1Q9H902 201 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 CLK4Q9HAZ1 481 aaKnown RBP17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 NDUFAF4Q9P032 175 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 MUC3AQ02505 3323 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 A0A0J9YY10 115 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 A0A1W2PR77 199 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 OR5K3A6NET4 321 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 J3KTA2 159 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 CSF2P04141 144 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 CTSBP07858 339 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 DNAJA1P31689 397 aaKnown RBP17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 DAPP51397 102 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 ITGA1P56199 1179 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 PCBP3P57721 371 aaKnown RBP17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 RUNX2Q13950 521 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 LTB4RQ15722 352 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 SYPL1Q16563 259 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 DUSP7Q16829 419 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 CRB2Q5IJ48 1285 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 CCDC80Q76M96 950 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 HMGN2P46Q86SG4 172 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 CYP4Z1Q86W10 505 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 OOSP2Q86WS3 158 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 OR9A2Q8NGT5 310 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 COL26A1Q96A83 441 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 SLC35G5Q96KT7 338 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 CSF3RQ99062 836 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 IL21RQ9HBE5 538 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 THUMPD1Q9NXG2 353 aaKnown RBP17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 USE1Q9NZ43 259 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms