RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 GPRASP1Q5JY77 1395 aa3.48□□□□□ -1.85
SCFD1-221ENST00000556534 ADAMTS9Q9P2N4 1935 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 IGLV3-10A0A075B6K4 115 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 E9PAM4 449 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 ANXA9O76027 345 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 SBK2P0C263 348 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 UROSP10746 265 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 VCLP18206 1134 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 PPP2R1AP30153 589 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 MATKP42679 507 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 MSLNQ13421 630 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-221ENST00000556534 HEPACAMQ14CZ8 416 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 PKN2Q16513 984 aaKnown RBP3.47□□□□□ -1.85
SCFD1-221ENST00000556534 GLRA4Q5JXX5 417 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 WDR25Q64LD2 544 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-221ENST00000556534 ARMCX5Q6P1M9 558 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 BAIAP2L2Q6UXY1 529 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 KCTD9Q7L273 389 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 SH2D6Q7Z4S9 175 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 TMEM126BQ8IUX1 230 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 TMCO5AQ8N6Q1 288 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 GVQW1Q8N7I0 195 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 ZNF491Q8N8L2 437 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 ARL10Q8N8L6 244 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 OR6T1Q8NGN1 323 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 OR1K1Q8NGR3 316 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 KIAA1524Q8TCG1 905 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 TCP11Q8WWU5 503 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 FAM46BQ96A09 425 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 PNPLA2Q96AD5 504 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 GUCD1Q96NT3 240 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 NAPBQ9H115 298 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 NT5DC2Q9H857 520 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 KCNK6Q9Y257 313 aa3.47□□□□□ -1.85
SCFD1-221ENST00000556534 SLC15A5A6NIM6 579 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 DUSP11O75319 330 aaKnown RBP3.46□□□□□ -1.86
SCFD1-221ENST00000556534 ZNF253O75346 499 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 CPNE6O95741 557 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 EPOP01588 193 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 GSTA2P09210 222 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 KRTAP1-4P0C5Y4 121 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 CT45A8P0DMV1 189 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 CT45A9P0DMV2 189 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 PTMSP20962 102 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 MTIF2P46199 727 aaKnown RBP3.46□□□□□ -1.86
SCFD1-221ENST00000556534 STX1BP61266 288 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 HSPA14Q0VDF9 509 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 Q1RN00 199 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 C17orf58Q2M2W7 97 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 CCDC92Q53HC0 331 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-221ENST00000556534 CT45A2Q5DJT8 189 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 REP15Q6BDI9 236 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 Q6ZRG5 221 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 ADCK1Q86TW2 530 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 SERINC5Q86VE9 423 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 HIPK1Q86Z02 1210 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 UNC45BQ8IWX7 931 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 CHDHQ8NE62 594 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-221ENST00000556534 GOLGA5Q8TBA6 731 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 ESAMQ96AP7 390 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 NTNG2Q96CW9 530 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 DDX50Q9BQ39 737 aaKnown RBP3.46□□□□□ -1.86
SCFD1-221ENST00000556534 NTMT1Q9BV86 223 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 SPG21Q9NZD8 308 aa3.46□□□□□ -1.86
SCFD1-221ENST00000556534 RALGAPA1Q6GYQ0 2036 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 SH3PXD2BA1X283 911 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 E2F3O00716 465 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 KINO60870 393 aaKnown RBP3.45□□□□□ -1.86
SCFD1-221ENST00000556534 KBTBD11O94819 623 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 IGKV3-15P01624 115 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 MT-ND3P03897 115 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 CHRNGP07510 517 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 CPA3P15088 417 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 SERPINH1P50454 418 aaKnown RBP3.45□□□□□ -1.86
SCFD1-221ENST00000556534 AP1B1Q10567 949 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 RCN2Q14257 317 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 RPS6KA1Q15418 735 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 FUT11Q495W5 492 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 LINC00242Q5T6M2 205 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 CD164L2Q6UWJ8 174 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 VITQ6UXI7 678 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 RAPH1Q70E73 1250 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 ZNF584Q8IVC4 421 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 HSCBQ8IWL3 235 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 GPD1LQ8N335 351 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 SAMD12Q8N8I0 201 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 OR8H1Q8NGG4 311 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 OR4F5Q8NH21 305 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 RHOXF1Q8NHV9 184 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 KRT35Q92764 455 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 HAS2Q92819 552 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 BCL2L2Q92843 193 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-221ENST00000556534 CABS1Q96KC9 395 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 RANBP9Q96S59 729 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 APOL2Q9BQE5 337 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 MAGEF1Q9HAY2 307 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 EXOC7Q9UPT5 735 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 KNSTRNQ9Y448 316 aa3.45□□□□□ -1.86
SCFD1-221ENST00000556534 SMIM30A4D0T7 59 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 ZNF263O14978 683 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms