RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ZNF37AP17032 561 aaPredicted RBP9.29□□□□□ -0.92
SCFD1-220ENST00000556486 IVDP26440 423 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 HNMTP50135 292 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 GPR143P51810 404 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 BTG2P78543 158 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 HECTD2Q5U5R9 776 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 STEAP4Q687X5 459 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 FAM45BPQ6NSW5 357 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 ARSKQ6UWY0 536 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 CXXC5Q7LFL8 322 aaKnown RBP9.29□□□□□ -0.92
SCFD1-220ENST00000556486 CTAGE6Q86UF2 777 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 LIX1LQ8IVB5 337 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 KLHDC8AQ8IYD2 350 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 CLYBLQ8N0X4 340 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 B3GNT7Q8NFL0 401 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 GOT1L1Q8NHS2 421 aaPredicted RBP9.29□□□□□ -0.92
SCFD1-220ENST00000556486 FAM45AQ8TCE6 357 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 CREB3L4Q8TEY5 395 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 LRRC39Q96DD0 335 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 ARSGQ96EG1 525 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 PTCHD1Q96NR3 888 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 AIF1LQ9BQI0 150 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 SPNS1Q9H2V7 528 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 DMRT3Q9NQL9 472 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 VWA7Q9Y334 891 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 KCNE2Q9Y6J6 123 aa9.29□□□□□ -0.92
SCFD1-220ENST00000556486 DNAJC13O75165 2243 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 COL6A5A8TX70 2615 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 PABPN1LA6NDY0 278 aaKnown RBP9.28□□□□□ -0.92
SCFD1-220ENST00000556486 FAM166BA8MTA8 275 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 G3V3Y1 287 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 KLRC4-KLRK1H3BQV0 150 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 PSMD12O00232 456 aaPredicted RBP9.28□□□□□ -0.92
SCFD1-220ENST00000556486 PEX1O43933 1283 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 B4GALT2O60909 372 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 MAOAP21397 527 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 UQCRC1P31930 480 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 CLCN2P51788 898 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 HSD17B7P56937 341 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 OLR1P78380 273 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 POU4F1Q01851 419 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 FAPQ12884 760 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 ILF2Q12905 390 aaKnown RBP9.28□□□□□ -0.92
SCFD1-220ENST00000556486 ANKRD34AQ69YU3 496 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 ZNF585AQ6P3V2 769 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 MDGA2Q7Z553 956 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 WDR53Q7Z5U6 358 aaPredicted RBP9.28□□□□□ -0.92
SCFD1-220ENST00000556486 THOC6Q86W42 341 aaKnown RBP9.28□□□□□ -0.92
SCFD1-220ENST00000556486 IGDCC3Q8IVU1 814 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 GPALPP1Q8IXQ4 340 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 TTLQ8NG68 377 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 OSBPL9Q96SU4 736 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 MCMBPQ9BTE3 642 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 NPLQ9BXD5 320 aaPredicted RBP9.28□□□□□ -0.92
SCFD1-220ENST00000556486 DEFB126Q9BYW3 111 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 PITHD1Q9GZP4 211 aaPredicted RBP9.28□□□□□ -0.92
SCFD1-220ENST00000556486 AICDAQ9GZX7 198 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 MRPL18Q9H0U6 180 aaKnown RBP9.28□□□□□ -0.92
SCFD1-220ENST00000556486 NECTIN3Q9NQS3 549 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 RASSF1Q9NS23 344 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 RNF112Q9ULX5 631 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 LIPGQ9Y5X9 500 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 TEX264Q9Y6I9 313 aa9.28□□□□□ -0.92
SCFD1-220ENST00000556486 CSPG4Q6UVK1 2322 aa9.27□□□□□ -0.92
SCFD1-220ENST00000556486 ZANQ9Y493 2812 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 A0A0G2JNJ9 132 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 PINLYPA6NC86 204 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 A8MUA0 341 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 C4orf51C9J302 202 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 ULK1O75385 1050 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 HEXAP06865 529 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 THBDP07204 575 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 GNAZP19086 355 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 RAB6AP20340 208 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 KIR2DL3P43628 341 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 SLC6A12P48065 614 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 RAB8AP61006 207 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 STXBP1P61764 594 aaKnown RBP9.27□□□□□ -0.93
SCFD1-220ENST00000556486 KEAP1Q14145 624 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 MORF4L2Q15014 288 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 PPP1R7Q15435 360 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 DEFB113Q30KQ7 82 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 ADPRMQ3LIE5 342 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 GXYLT1Q4G148 440 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 ARHGAP11AQ6P4F7 1023 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 PAMR1Q6UXH9 720 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 TMPRSS11BQ86T26 416 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 PDIK1LQ8N165 341 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 CA13Q8N1Q1 262 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 CIARTQ8N365 385 aaPredicted RBP9.27□□□□□ -0.93
SCFD1-220ENST00000556486 NKAPQ8N5F7 415 aaKnown RBP9.27□□□□□ -0.93
SCFD1-220ENST00000556486 VMP1Q96GC9 406 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 TSNARE1Q96NA8 513 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 WDR83Q9BRX9 315 aaKnown RBP9.27□□□□□ -0.93
SCFD1-220ENST00000556486 EHD1Q9H4M9 534 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 KLHL31Q9H511 634 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 NT5DC2Q9H857 520 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 EMC7Q9NPA0 242 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 Q9UFV3 132 aa9.27□□□□□ -0.93
SCFD1-220ENST00000556486 ZNF223Q9UK11 482 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms