RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 CPSF4O95639 269 aaKnown RBP10.37□□□□□ -0.75
TMEM260-208ENST00000555905 ALBP02768 609 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 CD63P08962 238 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 PORP16435 677 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-208ENST00000555905 EFNA1P20827 205 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-208ENST00000555905 FEN1P39748 380 aaKnown RBP10.37□□□□□ -0.75
TMEM260-208ENST00000555905 TRPC1P48995 793 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 XKP51811 444 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 NCBP2P52298 156 aaKnown RBP eCLIP10.37□□□□□ -0.75
TMEM260-208ENST00000555905 HNRNPFP52597 415 aaKnown RBP10.37□□□□□ -0.75
TMEM260-208ENST00000555905 WNT3P56703 355 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 PRSS12P56730 875 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 PCBP4P57723 403 aaKnown RBP10.37□□□□□ -0.75
TMEM260-208ENST00000555905 PLIN5Q00G26 463 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 BIKQ13323 160 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 PRSS53Q2L4Q9 553 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 MPEG1Q2M385 716 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 TRMT5Q32P41 509 aaKnown RBP10.37□□□□□ -0.75
TMEM260-208ENST00000555905 MINDY4Q4G0A6 757 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 LACTB2Q53H82 288 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-208ENST00000555905 PAGE3Q5JUK9 113 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 MLIPQ5VWP3 458 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 FAM180BQ6P0A1 224 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 C16orf89Q6UX73 402 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 HACD2Q6Y1H2 254 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 RETREG3Q86VR2 466 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 ZC3H7AQ8IWR0 971 aaKnown RBP10.37□□□□□ -0.75
TMEM260-208ENST00000555905 LRRC25Q8N386 305 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-208ENST00000555905 DPP10Q8N608 796 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 TMEM52Q8NDY8 209 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 OR4A15Q8NGL6 344 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 OR5P2Q8WZ92 322 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 GTF2H4Q92759 462 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 MIEF2Q96C03 454 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 FAM122AQ96E09 287 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 IL1RL2Q9HB29 575 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 NEUROD4Q9HD90 331 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 LANCL2Q9NS86 450 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 SLC22A11Q9NSA0 550 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 CTSFQ9UBX1 484 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 PADI1Q9ULC6 663 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 VPS4AQ9UN37 437 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 MAN2B2Q9Y2E5 1009 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 CEP250Q9BV73 2442 aa10.37□□□□□ -0.75
TMEM260-208ENST00000555905 SEC16AO15027 2179 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 CNOT1A5YKK6 2376 aaKnown RBP10.36□□□□□ -0.75
TMEM260-208ENST00000555905 KNTC1P50748 2209 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 IGLV3-12A0A075B6K2 115 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 SYNDIG1LA6NDD5 238 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 GYG2O15488 501 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 FGF17O60258 216 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 OR10H2O60403 315 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 SCN2BO60939 215 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 JRKO75564 520 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 C6orf47O95873 294 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 DLGAP3O95886 979 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 ABCB1P08183 1280 aaPredicted RBP10.36□□□□□ -0.75
TMEM260-208ENST00000555905 ZGLP1P0C6A0 271 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 C8orf89P0DMQ9 161 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 CPMP14384 443 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 GPC1P35052 558 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 FRKP42685 505 aaPredicted RBP10.36□□□□□ -0.75
TMEM260-208ENST00000555905 BTG2P78543 158 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 ID2Q02363 134 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 HSPB3Q12988 150 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 SERTAD2Q14140 314 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 MAP7Q14244 749 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 MLC1Q15049 377 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 CEBPEQ15744 281 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 VWA2Q5GFL6 755 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 QSOX2Q6ZRP7 698 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 RINLQ6ZS11 566 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 DHDDSQ86SQ9 333 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 MARCH9Q86YJ5 346 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 SCUBE1Q8IWY4 988 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 OR4N5Q8IXE1 308 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 PRSS58Q8IYP2 241 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 CCDC116Q8IYX3 515 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 CLECL1Q8IZS7 167 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 SHISA5Q8N114 240 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 ESX1Q8N693 406 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 TRIML2Q8N7C3 387 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 RBM15BQ8NDT2 890 aaKnown RBP10.36□□□□□ -0.75
TMEM260-208ENST00000555905 STT3BQ8TCJ2 826 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 ANKRD9Q96BM1 317 aaPredicted RBP10.36□□□□□ -0.75
TMEM260-208ENST00000555905 CNRIP1Q96F85 164 aaPredicted RBP10.36□□□□□ -0.75
TMEM260-208ENST00000555905 ZNF681Q96N22 645 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 PTCHD1Q96NR3 888 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 SLC46A1Q96NT5 459 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 AMDHD1Q96NU7 426 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 INPP5KQ9BT40 448 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 C1orf21Q9H246 121 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 CHST8Q9H2A9 424 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 SLC26A1Q9H2B4 701 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 WDR54Q9H977 334 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 SERHLQ9NQF3 203 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 SEMA3GQ9NS98 782 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 TAS2R9Q9NYW1 312 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 FOXJ2Q9P0K8 574 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 MAP10Q9P2G4 905 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms