RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SYT7O43581 403 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 EIF5BO60841 1220 aaKnown RBP2.29□□□□□ -2.04
SNX6-204ENST00000555541 IGKV3-11P04433 115 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 RLN1P04808 185 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 ODF2Q5BJF6 829 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 WSCD1Q658N2 575 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 CASC4Q6P4E1 433 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 C2orf66Q6UXQ4 117 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 C17orf64Q86WR6 236 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 CCDC197Q8NCU1 140 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 CHDHQ8NE62 594 aaPredicted RBP2.29□□□□□ -2.04
SNX6-204ENST00000555541 FRAT1Q92837 279 aaPredicted RBP2.29□□□□□ -2.04
SNX6-204ENST00000555541 ERO1AQ96HE7 468 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 PCED1BQ96HM7 432 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 MAGEB18Q96M61 343 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 IDI2Q9BXS1 227 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 ELL3Q9HB65 397 aaPredicted RBP2.29□□□□□ -2.04
SNX6-204ENST00000555541 IMPAD1Q9NX62 359 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 MIS18AQ9NYP9 233 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 PLEK2Q9NYT0 353 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 NFKBIL1Q9UBC1 381 aaPredicted RBP2.29□□□□□ -2.04
SNX6-204ENST00000555541 ABCG2Q9UNQ0 655 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 OR1A2Q9Y585 309 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 FRG2CA6NGY1 282 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 ZFP92A6NM28 416 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 GPAA1O43292 621 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 PRAMEF12O95522 483 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 APBB3O95704 486 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 CD1EP15812 388 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 MTIF2P46199 727 aaKnown RBP2.28□□□□□ -2.04
SNX6-204ENST00000555541 UCNP55089 124 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 PRKCEQ02156 737 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 CKAP4Q07065 602 aaKnown RBP2.28□□□□□ -2.04
SNX6-204ENST00000555541 MEF2DQ14814 521 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 UNC50Q53HI1 259 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 SNRNP48Q6IEG0 339 aaKnown RBP2.28□□□□□ -2.04
SNX6-204ENST00000555541 SIGLEC15Q6ZMC9 328 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 ICA1LQ8NDH6 482 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 GOLGA5Q8TBA6 731 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 SETD6Q8TBK2 473 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 GANCQ8TET4 914 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 VSIG2Q96IQ7 327 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 ST6GALNAC5Q9BVH7 336 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 LRRC2Q9BYS8 371 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 FAM212BQ9NTI7 297 aaPredicted RBP2.28□□□□□ -2.04
SNX6-204ENST00000555541 SPG21Q9NZD8 308 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 EIF3KQ9UBQ5 218 aaKnown RBP2.28□□□□□ -2.04
SNX6-204ENST00000555541 RPS6KB2Q9UBS0 482 aa2.28□□□□□ -2.04
SNX6-204ENST00000555541 SLC30A4O14863 429 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 ST8SIA3O43173 380 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 ANXA9O76027 345 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 DUSP14O95147 198 aaKnown RBP2.27□□□□□ -2.05
SNX6-204ENST00000555541 GJB5O95377 273 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 CALML3P27482 149 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 CCND3P30281 292 aaPredicted RBP2.27□□□□□ -2.05
SNX6-204ENST00000555541 SOAT1P35610 550 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 MFAP2P55001 183 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 WNT4P56705 351 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 STX17P56962 302 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 AKAP17AQ02040 695 aaKnown RBP2.27□□□□□ -2.05
SNX6-204ENST00000555541 NUCB1Q02818 461 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 SPHARQ15513 63 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 MICAQ29983 383 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 PAN3Q58A45 887 aaKnown RBP2.27□□□□□ -2.05
SNX6-204ENST00000555541 DCAF12Q5T6F0 453 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 FAM219BQ5XKK7 198 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 OTOAQ7RTW8 1153 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 WDR49Q8IV35 697 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 OR8H2Q8N162 312 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 OR2L5Q8NG80 312 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 SPATA18Q8TC71 538 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 CRYGNQ8WXF5 182 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 FAM122AQ96E09 287 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 PIWIL1Q96J94 861 aaKnown RBP2.27□□□□□ -2.05
SNX6-204ENST00000555541 CASD1Q96PB1 797 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 SSX3Q99909 188 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 ZNF559Q9BR84 538 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 CUEDC2Q9H467 287 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 MYOZ2Q9NPC6 264 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 TAS2R16Q9NYV7 291 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 TMEM9Q9P0T7 183 aa2.27□□□□□ -2.05
SNX6-204ENST00000555541 ACEP12821 1306 aa2.26□□□□□ -2.05
SNX6-204ENST00000555541 MAGEB16A2A368 324 aa2.26□□□□□ -2.05
SNX6-204ENST00000555541 EFCAB7A8K855 629 aa2.26□□□□□ -2.05
SNX6-204ENST00000555541 FIBPO43427 364 aa2.26□□□□□ -2.05
SNX6-204ENST00000555541 DKC1O60832 514 aaKnown RBP eCLIP2.26□□□□□ -2.05
SNX6-204ENST00000555541 SNRPCP09234 159 aaKnown RBP2.26□□□□□ -2.05
SNX6-204ENST00000555541 MMP10P09238 476 aa2.26□□□□□ -2.05
SNX6-204ENST00000555541 SBK2P0C263 348 aa2.26□□□□□ -2.05
SNX6-204ENST00000555541 SLC35E2P0CK97 266 aa2.26□□□□□ -2.05
SNX6-204ENST00000555541 LAMP1P11279 417 aa2.26□□□□□ -2.05
SNX6-204ENST00000555541 ARHGDIAP52565 204 aa2.26□□□□□ -2.05
SNX6-204ENST00000555541 ZNF133P52736 654 aaPredicted RBP2.26□□□□□ -2.05
SNX6-204ENST00000555541 C1orf189Q5VU69 101 aa2.26□□□□□ -2.05
SNX6-204ENST00000555541 APOBEC3FQ8IUX4 373 aaKnown RBP2.26□□□□□ -2.05
SNX6-204ENST00000555541 FBXW8Q8N3Y1 598 aa2.26□□□□□ -2.05
SNX6-204ENST00000555541 UXS1Q8NBZ7 420 aa2.26□□□□□ -2.05
SNX6-204ENST00000555541 SLCO4A1Q96BD0 722 aa2.26□□□□□ -2.05
SNX6-204ENST00000555541 SNRNP40Q96DI7 357 aaKnown RBP2.26□□□□□ -2.05
SNX6-204ENST00000555541 NUSAP1Q9BXS6 441 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms