RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ALDH9A1P49189 494 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 ARFIP2P53365 341 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 TMPRSS3P57727 454 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 OR4D2P58180 307 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 VAC14Q08AM6 782 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 CDC20Q12834 499 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 PCOLCEQ15113 449 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 TMEM198Q66K66 360 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 LANCL3Q6ZV70 420 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 PIGWQ7Z7B1 504 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 TICAM1Q8IUC6 712 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 TMEM102Q8N9M5 508 aaPredicted RBP11.87□□□□□ -0.51
SYNE2-219ENST00000555323 CLHC1Q8NHS4 586 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 TESCQ96BS2 214 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 CATSPER2Q96P56 530 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 MESP1Q9BRJ9 268 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 PELOQ9BRX2 385 aaKnown RBP11.87□□□□□ -0.51
SYNE2-219ENST00000555323 TMEM120AQ9BXJ8 343 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 EPN3Q9H201 632 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 ADAP2Q9NPF8 381 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 MIEF1Q9NQG6 463 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 WDR70Q9NW82 654 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 C5AR2Q9P296 337 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 ZNF780BQ9Y6R6 833 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 DMXL2Q8TDJ6 3036 aa11.87□□□□□ -0.51
SYNE2-219ENST00000555323 CDC14CA4D256 554 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 PEX12O00623 359 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 AKAP10O43572 662 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 SNX3O60493 162 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 LRATO95237 230 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 HPP00738 406 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 ICAM2P13598 275 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 MPIP34949 423 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 ATP4BP51164 291 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 GPR143P51810 404 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 SOX8P57073 446 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 ID2Q02363 134 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 MLC1Q15049 377 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 ELAVL1Q15717 326 aaKnown RBP11.86□□□□□ -0.51
SYNE2-219ENST00000555323 MPEG1Q2M385 716 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 SFT2D3Q587I9 215 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 FAAH2Q6GMR7 532 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 CPLX4Q7Z7G2 160 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 KRTCAP2Q8N6L1 136 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 GLB1L3Q8NCI6 653 aaPredicted RBP11.86□□□□□ -0.51
SYNE2-219ENST00000555323 NFAM1Q8NET5 270 aaPredicted RBP11.86□□□□□ -0.51
SYNE2-219ENST00000555323 OR8J2Q8NGG1 315 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 PTPMT1Q8WUK0 201 aaPredicted RBP11.86□□□□□ -0.51
SYNE2-219ENST00000555323 C10orf82Q8WW14 230 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 GFM2Q969S9 779 aaKnown RBP11.86□□□□□ -0.51
SYNE2-219ENST00000555323 C8orf44Q96CB5 159 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 PPCDCQ96CD2 204 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 CTHRC1Q96CG8 243 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 TEX37Q96LM6 180 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 FER1L6-AS2Q96M78 137 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 RILPQ96NA2 401 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 CNTNAP3BQ96NU0 1288 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 PRPF18Q99633 342 aaKnown RBP11.86□□□□□ -0.51
SYNE2-219ENST00000555323 LPAR4Q99677 370 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 TUBB6Q9BUF5 446 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 CNTNAP3Q9BZ76 1288 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 DPY30Q9C005 99 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 ZNF385DQ9H6B1 395 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 CLMPQ9H6B4 373 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 ZIM2Q9NZV7 527 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 SH3BP4Q9P0V3 963 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 TRIM33Q9UPN9 1127 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 POLHQ9Y253 713 aa11.86□□□□□ -0.51
SYNE2-219ENST00000555323 NUP210LQ5VU65 1888 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 A0A1W2PS29 197 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 E9PBE3 544 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 KLHL41O60662 606 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 ERAL1O75616 437 aaKnown RBP11.85□□□□□ -0.51
SYNE2-219ENST00000555323 IFI6P09912 130 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 GPX3P22352 226 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 SOX18P35713 384 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 HPCAL1P37235 193 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 FEN1P39748 380 aaKnown RBP11.85□□□□□ -0.51
SYNE2-219ENST00000555323 CLNS1AP54105 237 aaKnown RBP11.85□□□□□ -0.51
SYNE2-219ENST00000555323 UFM1P61960 85 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 PLIN5Q00G26 463 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 SRSF11Q05519 484 aaKnown RBP11.85□□□□□ -0.51
SYNE2-219ENST00000555323 MGAT2Q10469 447 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 MAP4K2Q12851 820 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 ATP1A4Q13733 1029 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 RPS6KA2Q15349 733 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 SPRED3Q2MJR0 410 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 DPY19L1Q2PZI1 675 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 PRICKLE4Q2TBC4 344 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 ZNF750Q32MQ0 723 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 ZNF385BQ569K4 471 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 DCAF10Q5QP82 559 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 CPTPQ5TA50 214 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 ATP1A1-AS1Q5TC04 95 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 PLAG1Q6DJT9 500 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 PAPD4Q6PIY7 484 aaKnown RBP11.85□□□□□ -0.51
SYNE2-219ENST00000555323 APLFQ8IW19 511 aaPredicted RBP11.85□□□□□ -0.51
SYNE2-219ENST00000555323 CCDC116Q8IYX3 515 aa11.85□□□□□ -0.51
SYNE2-219ENST00000555323 LRRC25Q8N386 305 aaPredicted RBP11.85□□□□□ -0.51
SYNE2-219ENST00000555323 CPSF7Q8N684 471 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms