RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 OR8D2Q9GZM6 311 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 MS4A12Q9NXJ0 267 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 STMN3Q9NZ72 180 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 MCM8Q9UJA3 840 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 DLGAP4Q9Y2H0 992 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 NTNG1Q9Y2I2 539 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 TRAF6Q9Y4K3 522 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 POLR3HQ9Y535 204 aaPredicted RBP11.51□□□□□ -0.57
SYNE2-214ENST00000554928 PIP5K1BO14986 540 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 TM9SF1O15321 606 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 ZNF354AO60765 605 aaPredicted RBP11.5□□□□□ -0.57
SYNE2-214ENST00000554928 SASH3O75995 380 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 JUNP05412 331 aaKnown RBP11.5□□□□□ -0.57
SYNE2-214ENST00000554928 UQCRHP07919 91 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 FGF4P08620 206 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 ALOX15P16050 662 aaPredicted RBP11.5□□□□□ -0.57
SYNE2-214ENST00000554928 TNNI3P19429 210 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 TACR1P25103 407 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 TLX1P31314 330 aaPredicted RBP11.5□□□□□ -0.57
SYNE2-214ENST00000554928 SOX18P35713 384 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 TAS2R50P59544 299 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 ACSM2AQ08AH3 577 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 ASPHQ12797 758 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 SERTAD2Q14140 314 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 KIAA0040Q15053 153 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 IMPG1Q17R60 797 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 TTMPQ5BVD1 217 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 SPDYAQ5MJ70 313 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 ABHD17BQ5VST6 288 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 ACSM2BQ68CK6 577 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 OR52E8Q6IFG1 317 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 CROCCP2Q86T23 111 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 SIMC1Q8NDZ2 872 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 ZNF721Q8TF20 911 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 TWIST2Q8WVJ9 160 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 C3orf30Q96M34 536 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 DGAT2Q96PD7 388 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 SIGLEC12Q96PQ1 595 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 SORT1Q99523 831 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 PAIP2Q9BPZ3 127 aaKnown RBP11.5□□□□□ -0.57
SYNE2-214ENST00000554928 HES7Q9BYE0 225 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 EPS8L2Q9H6S3 715 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 EXO1Q9UQ84 846 aaKnown RBP11.5□□□□□ -0.57
SYNE2-214ENST00000554928 B3GNT3Q9Y2A9 372 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 PCDHGA10Q9Y5H3 936 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 CLCA3PQ9Y6N3 262 aa11.5□□□□□ -0.57
SYNE2-214ENST00000554928 BLACEA4D250 179 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 TTLL8A6PVC2 850 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 GABRR3A8MPY1 467 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 H3BQF6 201 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 BIRC5O15392 142 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 SKAP2O75563 359 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-214ENST00000554928 RSL1D1O76021 490 aaKnown RBP11.49□□□□□ -0.57
SYNE2-214ENST00000554928 ZWINTO95229 277 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 IGKV3-11P04433 115 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 SERPINE1P05121 402 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 FEN1P39748 380 aaKnown RBP11.49□□□□□ -0.57
SYNE2-214ENST00000554928 CD96P40200 585 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 ALDH9A1P49189 494 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 TNFSF10P50591 281 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 XKP51811 444 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 MLF1P58340 268 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 ERVK-8P63133 956 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 ARG2P78540 354 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 TUBA3CQ13748 450 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 TERF2Q15554 542 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 SPIN4Q56A73 249 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 SLC48A1Q6P1K1 146 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 GALNT18Q6P9A2 607 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 TUBA3EQ6PEY2 450 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 RPS19BP1Q86WX3 136 aaKnown RBP11.49□□□□□ -0.57
SYNE2-214ENST00000554928 ZNF227Q86WZ6 799 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 C9orf40Q8IXQ3 194 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 ST13P4Q8IZP2 240 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-214ENST00000554928 CLYBLQ8N0X4 340 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 TMEM132CQ8N3T6 1108 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 CISD2Q8N5K1 135 aaKnown RBP11.49□□□□□ -0.57
SYNE2-214ENST00000554928 ZNF781Q8N8C0 355 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 OR1N1Q8NGS0 311 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 OR14A16Q8NHC5 309 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 CDC26Q8NHZ8 85 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.49□□□□□ -0.57
SYNE2-214ENST00000554928 HAS2Q92819 552 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 CNRIP1Q96F85 164 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-214ENST00000554928 VMP1Q96GC9 406 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 EGLN2Q96KS0 407 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 ZNF354BQ96LW1 612 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 DEFB126Q9BYW3 111 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 ILKAPQ9H0C8 392 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-214ENST00000554928 WDR41Q9HAD4 459 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 NMRK1Q9NWW6 199 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 SIRT5Q9NXA8 310 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 ERVK-19Q9WJR5 959 aa11.49□□□□□ -0.57
SYNE2-214ENST00000554928 ATP6AP2A0A1C7CYW4 349 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 GNG14A0A1W2PPG7 69 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 C1orf226A1L170 272 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 OR5H15A6NDH6 313 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 SLC28A1O00337 649 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 OR10H2O60403 315 aa11.48□□□□□ -0.57
SYNE2-214ENST00000554928 KLHL41O60662 606 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms