RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 NOVP48745 357 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 PGGT1BP53609 377 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 C2orf27AQ580R0 203 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 ZNF805Q5CZA5 627 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 GLT8D1Q68CQ7 371 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 OR5T2Q8NGG2 359 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.37□□□□□ -0.271e-6■■■■■ 28.3
VTI1B-204ENST00000554659 MAPK15Q8TD08 544 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 PRAP1Q96NZ9 151 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 CPNE5Q9HCH3 593 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 OR2S2Q9NQN1 319 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 KCNN3Q9UGI6 736 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 HIF3AQ9Y2N7 669 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 C12orf71A8MTZ7 269 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 A8MUA0 341 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 EIF1AYO14602 144 aaKnown RBP13.37□□□□□ -0.27
VTI1B-204ENST00000554659 HSPA12AO43301 675 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 LDB2O43679 373 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 FOXD2O60548 495 aaPredicted RBP13.37□□□□□ -0.27
VTI1B-204ENST00000554659 MS4A2Q01362 244 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 POU4F2Q12837 409 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 SLC15A4Q8N697 577 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 FUBP1Q96AE4 644 aaKnown RBP13.37□□□□□ -0.27
VTI1B-204ENST00000554659 SCRN2Q96FV2 425 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 TTTY10Q9BZA0 68 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 LHPPQ9H008 270 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 KLF15Q9UIH9 416 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 MYH8P13535 1937 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 CAPN14A8MX76 684 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 B4DGG1 531 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 RETP07949 1114 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 FGF4P08620 206 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 ZNF16P17020 682 aaPredicted RBP13.37□□□□□ -0.27
VTI1B-204ENST00000554659 EDNRBP24530 442 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 OTUB2Q96DC9 234 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 DPH2Q9BQC3 489 aaPredicted RBP13.37□□□□□ -0.27
VTI1B-204ENST00000554659 TP63Q9H3D4 680 aaPredicted RBP13.37□□□□□ -0.27
VTI1B-204ENST00000554659 FBXL12Q9NXK8 326 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 YARS2Q9Y2Z4 477 aaKnown RBP13.37□□□□□ -0.27
VTI1B-204ENST00000554659 PHRF1Q9P1Y6 1649 aaKnown RBP13.37□□□□□ -0.27
VTI1B-204ENST00000554659 A0A1B0GVI7 797 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 GLOD5A6NK44 160 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 EMC8O43402 210 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 ADAP00813 363 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 FHP07954 510 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 DNASE1P24855 282 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 GMPRP36959 345 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 DOC2AQ14183 400 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 SGCBQ16585 318 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 TMEM53Q6P2H8 277 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 FBXO27Q8NI29 283 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 CRYGNQ8WXF5 182 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 TESCQ96BS2 214 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 VNN3Q9NY84 501 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 GRXCR2A6NFK2 248 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 SPARCP09486 303 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 TLE2Q04725 743 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 ALG10BQ5I7T1 473 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 BEND4Q6ZU67 534 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 CEACAM19Q7Z692 300 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 OR8K3Q8NH51 312 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 SYT11Q9BT88 431 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 SLC5A7Q9GZV3 580 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 TMEM185BQ9H7F4 350 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 RABL2AQ9UBK7 228 aaPredicted RBP13.36□□□□□ -0.27
VTI1B-204ENST00000554659 SARDHQ9UL12 918 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 RABL2BQ9UNT1 228 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 RGS9O75916 674 aaPredicted RBP13.36□□□□□ -0.27
VTI1B-204ENST00000554659 MRPL3P09001 348 aaKnown RBP13.36□□□□□ -0.27
VTI1B-204ENST00000554659 CAPN3P20807 821 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 HMGCLP35914 325 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 RBMXP38159 391 aaKnown RBP13.36□□□□□ -0.27
VTI1B-204ENST00000554659 ETV3P41162 512 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 MAGEA6P43360 314 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 HERV-K104P61576 105 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 FAM214AQ32MH5 1076 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 CES4AQ5XG92 561 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 C12orf40Q86WS4 652 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 MFSD2AQ8NA29 543 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 SETD7Q8WTS6 366 aaKnown RBP13.36□□□□□ -0.27
VTI1B-204ENST00000554659 PGAP3Q96FM1 320 aaPredicted RBP13.36□□□□□ -0.27
VTI1B-204ENST00000554659 PCDH17O14917 1159 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 LEFTY1O75610 366 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 RBBP9O75884 186 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 HTR2AP28223 471 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 UGT2B10P36537 528 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 TEAD2Q15562 447 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 RAB6CQ53S08 254 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 CCDC116Q8IYX3 515 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 NLGN2Q8NFZ4 835 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 NRG4Q8WWG1 115 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 KCNN1Q92952 543 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 FEVQ99581 238 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 ORAI3Q9BRQ5 295 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 POLDIP3Q9BY77 421 aaKnown RBP13.36□□□□□ -0.27
VTI1B-204ENST00000554659 RAB6CQ9H0N0 254 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 TMEM181Q9P2C4 612 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 INSL6Q9Y581 213 aa13.36□□□□□ -0.27
VTI1B-204ENST00000554659 IGKV6D-21A0A0A0MT36 114 aa13.35□□□□□ -0.27
VTI1B-204ENST00000554659 EIF3FO00303 357 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms