RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.86□□□□□ -0.83
SHMT2-215ENST00000554656 CA13Q8N1Q1 262 aa9.86□□□□□ -0.83
SHMT2-215ENST00000554656 GHDCQ8N2G8 530 aa9.86□□□□□ -0.83
SHMT2-215ENST00000554656 PTGR2Q8N8N7 351 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-215ENST00000554656 ACBD4Q8NC06 268 aa9.86□□□□□ -0.83
SHMT2-215ENST00000554656 TMEM52Q8NDY8 209 aa9.86□□□□□ -0.83
SHMT2-215ENST00000554656 ATL1Q8WXF7 558 aa9.86□□□□□ -0.83
SHMT2-215ENST00000554656 MTFMTQ96DP5 389 aaKnown RBP9.86□□□□□ -0.83
SHMT2-215ENST00000554656 TMEM237Q96Q45 408 aa9.86□□□□□ -0.83
SHMT2-215ENST00000554656 C20orf27Q9GZN8 174 aa9.86□□□□□ -0.83
SHMT2-215ENST00000554656 RHBGQ9H310 441 aa9.86□□□□□ -0.83
SHMT2-215ENST00000554656 PRDM9Q9NQV7 894 aa9.86□□□□□ -0.83
SHMT2-215ENST00000554656 SLC22A14Q9Y267 594 aa9.86□□□□□ -0.83
SHMT2-215ENST00000554656 HRH3Q9Y5N1 445 aa9.86□□□□□ -0.83
SHMT2-215ENST00000554656 MED13LQ71F56 2210 aa9.86□□□□□ -0.83
SHMT2-215ENST00000554656 CCT8L1PA6NM43 557 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 UBXN8O00124 270 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 PRKNO60260 465 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-215ENST00000554656 PRAMEF4O60810 478 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 LYPLA1O75608 230 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-215ENST00000554656 CLDN14O95500 239 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 S100BP04271 92 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-215ENST00000554656 SERPINA6P08185 405 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 ESRRAP11474 423 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-215ENST00000554656 ZNF24P17028 368 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 ARRB2P32121 409 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 MEOX1P50221 254 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 HLCSP50747 726 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 RPL14P50914 215 aaKnown RBP9.85□□□□□ -0.83
SHMT2-215ENST00000554656 SMSP52788 366 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 RUNX2Q13950 521 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 PCBP2Q15366 365 aaKnown RBP eCLIP9.85□□□□□ -0.83
SHMT2-215ENST00000554656 TGFBIQ15582 683 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 UNC50Q53HI1 259 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 ARL13AQ5H913 290 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-215ENST00000554656 PRAMEF9Q5VWM5 478 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 FAM91A1Q658Y4 838 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 SLCO4C1Q6ZQN7 724 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 TRPM8Q7Z2W7 1104 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 VN1R5Q7Z5H4 357 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 TCAIMQ8N3R3 496 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 MARVELD2Q8N4S9 558 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 HORMAD2Q8N7B1 307 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 CCNYL1Q8N7R7 359 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 UBTD2Q8WUN7 234 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 QRFPRQ96P65 431 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 AIF1LQ9BQI0 150 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 TRIM54Q9BYV2 358 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 GSTO2Q9H4Y5 243 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 RUBCNLQ9H714 662 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 DYRK1BQ9Y463 629 aa9.85□□□□□ -0.83
SHMT2-215ENST00000554656 NCKAP5O14513 1909 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 A0A0G2JND7 137 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 TRBV11-1A0A0K0K1C0 115 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 ERICH4A6NGS2 130 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 TMEM200CA6NKL6 621 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 HDAC3O15379 428 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 MLYCDO95822 493 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 FGF4P08620 206 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 ABOP16442 354 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 GDF5P43026 501 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 SLC6A12P48065 614 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 PIK3CGP48736 1102 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 CYB561P49447 251 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 GPR143P51810 404 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 SKP1P63208 163 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 IFT88Q13099 833 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 RBBP5Q15291 538 aaKnown RBP9.84□□□□□ -0.83
SHMT2-215ENST00000554656 PFKFB4Q16877 469 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 CMPK2Q5EBM0 449 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 SULT1C3Q6IMI6 304 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 ADNP2Q6IQ32 1131 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 NIPAL1Q6NVV3 410 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 C16orf47Q6ZP98 133 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-215ENST00000554656 CCDC121Q6ZUS5 278 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 MDGA2Q7Z553 956 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 SULF2Q8IWU5 870 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 KLHDC8AQ8IYD2 350 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 TBC1D19Q8N5T2 526 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 ZNF781Q8N8C0 355 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 FAM98AQ8NCA5 519 aaKnown RBP9.84□□□□□ -0.83
SHMT2-215ENST00000554656 TRPV3Q8NET8 790 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 RFWD2Q8NHY2 731 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 PHF10Q8WUB8 498 aaKnown RBP9.84□□□□□ -0.83
SHMT2-215ENST00000554656 CCT6BQ92526 530 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 GAL3ST3Q96A11 431 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 MS4A6EQ96DS6 147 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 PHF21BQ96EK2 531 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 TMEM120AQ9BXJ8 343 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 DEFB126Q9BYW3 111 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 CLK4Q9HAZ1 481 aaKnown RBP9.84□□□□□ -0.83
SHMT2-215ENST00000554656 MRGBPQ9NV56 204 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 CD274Q9NZQ7 290 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 DCTN4Q9UJW0 460 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 PPIEQ9UNP9 301 aaKnown RBP9.84□□□□□ -0.83
SHMT2-215ENST00000554656 KLF13Q9Y2Y9 288 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-215ENST00000554656 MMACHCQ9Y4U1 282 aa9.84□□□□□ -0.83
SHMT2-215ENST00000554656 A0A0G2JMM0 328 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 A0A1W2PPB8 328 aa9.83□□□□□ -0.84
SHMT2-215ENST00000554656 A0A1W2PRS3 328 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms