RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 A8MU76 341 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 NPIPA2E9PIF3 369 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 H3BNC9 293 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 K7ESF4 209 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 M0QZK8 103 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 PSMD12O00232 456 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 CTDSP2O14595 271 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 INPPL1O15357 1258 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 BUD23O43709 281 aaKnown RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 USP12O75317 370 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 SLC43A1O75387 559 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 PRKRAO75569 313 aaKnown RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 SPAG6O75602 509 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 MFN2O95140 757 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 DIRAS3O95661 229 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 NDST3O95803 873 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 GOT2P00505 430 aaKnown RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 IFNA10P01566 189 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 MMP1P03956 469 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 SHBGP04278 402 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 CD1AP06126 327 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 CRHP06850 196 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 CD3GP09693 182 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 IQCF3P0C7M6 154 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 FAM58BPP0C7Q3 252 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 SUPT20HL2P0C7V6 817 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ACADMP11310 421 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ADRB3P13945 408 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 JUPP14923 745 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 IL12AP29459 219 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 UQCRC1P31930 480 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 YWHABP31946 246 aaKnown RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 FDFT1P37268 417 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 WASP42768 502 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 MAGEA4P43358 317 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 CDKN1BP46527 198 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 SLC1A6P48664 564 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 CAMLGP49069 296 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 SLC11A2P49281 568 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 NDUFV1P49821 464 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 CEBPGP53567 150 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 MLLT10P55197 1068 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 SOX8P57073 446 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 MAGOHP61326 146 aaKnown RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 PSPHP78330 225 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 GAD2Q05329 585 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ELP6Q0PNE2 266 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 HYAL1Q12794 435 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 GRIK2Q13002 908 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 GPM6BQ13491 265 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 PEX6Q13608 980 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ZNHIT3Q15649 155 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 TOMM34Q15785 309 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 SMAD1Q15797 465 aaKnown RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ADIPOQQ15848 244 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 AP5B1Q2VPB7 878 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 TRMT5Q32P41 509 aaKnown RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 INAVAQ3KP66 663 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 HSDL1Q3SXM5 330 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 CHRFAM7AQ494W8 412 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ZFP69Q49AA0 526 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 GXYLT1Q4G148 440 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 HSD17B12Q53GQ0 312 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 LIPJQ5W064 366 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 LRRC66Q68CR7 880 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 C11orf87Q6NUJ2 197 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 TAPT1Q6NXT6 567 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 GDPD3Q7L5L3 318 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 SMIM15Q7Z3B0 74 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 TRMT11Q7Z4G4 463 aaKnown RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 P4HA3Q7Z4N8 544 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 TMEM126BQ8IUX1 230 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 CCDC71Q8IV32 467 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ARID3BQ8IVW6 561 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 KLHL7Q8IXQ5 586 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 DSELQ8IZU8 1212 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF561Q8N587 486 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 LRRC17Q8N6Y2 441 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 SMRP1Q8NCR6 262 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 TMEM35BQ8NCS4 154 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 OR52M1Q8NGK5 317 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 CYP2W1Q8TAV3 490 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 HM13Q8TCT9 377 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 BLOC1S5Q8TDH9 187 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ST8SIA4Q92187 359 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ELMO1Q92556 727 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 GTF2H4Q92759 462 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 MAGOHBQ96A72 148 aaKnown RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 EXOSC8Q96B26 276 aaKnown RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 PGM2Q96G03 612 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF514Q96K75 400 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 MSLNLQ96KJ4 702 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 CASD1Q96PB1 797 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 TAAR1Q96RJ0 339 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ACBD6Q9BR61 282 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 MED18Q9BUE0 208 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 TEX12Q9BXU0 123 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 RNF26Q9BY78 433 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 CCDC90BQ9GZT6 254 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms