RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ERVPABLB-1P60509 514 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 RPS14P62263 151 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 YBX1P67809 324 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 CACNG1Q06432 222 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PTP4A2Q12974 167 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TUBB3Q13509 450 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 OLIG2Q13516 323 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CLCA4Q14CN2 919 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 DPY19L1Q2PZI1 675 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SLC36A3Q495N2 470 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 GALNTL6Q49A17 601 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 KHDC1LQ5JSQ8 128 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 KHDRBS2Q5VWX1 349 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 RESP18Q5W5W9 173 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CLEC18BQ6UXF7 455 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 C3orf62Q6ZUJ4 267 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 POLNQ7Z5Q5 900 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 LINC00523Q86TU6 105 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 YRDCQ86U90 279 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 TRIM69Q86WT6 500 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ERICH1Q86X53 443 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PPP1R3BQ86XI6 285 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CBWD2Q8IUF1 395 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CLEC18CQ8NCF0 446 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 OR7G3Q8NG95 312 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 OR4K14Q8NGD5 310 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 NANPQ8TBE9 248 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SAP25Q8TEE9 199 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PAQR8Q8TEZ7 354 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TP53INP1Q96A56 240 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 NMD3Q96D46 503 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 TOE1Q96GM8 510 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 PAGE5Q96GU1 130 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ZNF578Q96N58 590 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 FCRL3Q96P31 734 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 KRT12Q99456 494 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 C7orf50Q9BRJ6 194 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 FEM1AQ9BSK4 669 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ALKBH7Q9BT30 221 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 DUSP16Q9BY84 665 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 WWP1Q9H0M0 922 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 THAP2Q9H0W7 228 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SDCBP2Q9H190 292 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 OR51V1Q9H2C8 321 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 MMP27Q9H306 513 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TOR3AQ9H497 397 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 DPEP3Q9H4B8 488 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 MTG2Q9H4K7 406 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 GEMIN7Q9H840 131 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 UNKLQ9H9P5 680 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 GPN1Q9HCN4 374 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 SEMA4BQ9NPR2 832 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 MAN2C1Q9NTJ4 1040 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ARMC1Q9NVT9 282 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 OSER1Q9NX31 292 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ELOVL2Q9NXB9 296 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 THUMPD1Q9NXG2 353 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 TMEFF2Q9UIK5 374 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 NOCTQ9UK39 431 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 FAF1Q9UNN5 650 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 PLEKHA6Q9Y2H5 1048 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 FNDC3AQ9Y2H6 1198 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 SLC22A7Q9Y694 548 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SAR1BQ9Y6B6 198 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 A0A1W2PQ27 194 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 A0A1W2PQ64 194 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 CD8B2A6NJW9 211 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ZNF98A6NK75 572 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 TMEM114B3SHH9 223 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ZNF701M0R085 212 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 PDXKO00764 312 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 CLDN4O14493 209 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 TM9SF1O15321 606 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 PSMD3O43242 534 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 SUV39H1O43463 412 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 NOS1APO75052 506 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 SNNO75324 88 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 CCNKO75909 580 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 CALCAP01258 141 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 IL2RAP01589 272 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 IGHV4-34P06331 123 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 CCL2P13500 99 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 IFNGR1P15260 489 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 PRPS1L1P21108 318 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 PAICSP22234 425 aaKnown RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 MYF6P23409 242 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 SERPINB1P30740 379 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 THBS2P35442 1172 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ID1P41134 155 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 IL12RB1P42701 662 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 P2RY4P51582 365 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 SLC16A1P53985 500 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 NXPH1P58417 271 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 SLC6A3Q01959 620 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 MEF2AQ02078 507 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 SLC3A1Q07837 685 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 EIF4EBP2Q13542 120 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 ZNF234Q14588 700 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 NR1I3Q14994 352 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms