RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 TESCQ96BS2 214 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 PYURFQ96I23 114 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ITCHQ96J02 903 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 TBATAQ96M53 351 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF583Q96ND8 569 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 PSKH2Q96QS6 385 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF300Q96RE9 604 aaPredicted RBP5.66□□□□□ -1.5
VPS33B-203ENST00000554264 MBOAT4Q96T53 435 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 PITX2Q99697 317 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 SEMA3CQ99985 751 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 MGME1Q9BQP7 344 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 CCDC32Q9BV29 185 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 THUMPD3Q9BV44 507 aaKnown RBP5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ITPAQ9BY32 194 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 DPY30Q9C005 99 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 CLMPQ9H6B4 373 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 RDH14Q9HBH5 336 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 DIABLOQ9NR28 239 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 PLCXD1Q9NUJ7 323 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 C1orf109Q9NX04 203 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.66□□□□□ -1.5
VPS33B-203ENST00000554264 PILRBQ9UKJ0 227 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 CRYL1Q9Y2S2 319 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 GRIP1Q9Y3R0 1128 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 KIF26AQ9ULI4 1882 aaPredicted RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 TRBV5-3A0A0A0MS03 114 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 TRAV19A0A0A6YYK7 116 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 CXorf51AA0A1B0GTR3 108 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 FAM172BPA6NC97 362 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 B8ZZF3 427 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 J3QRK9 145 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 ANKRD28O15084 1053 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 MSI1O43347 362 aaKnown RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 HS6ST1O60243 411 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 MPZL2O60487 215 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 ULK1O75385 1050 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 CREG1O75629 220 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 SIX3O95343 332 aaPredicted RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 IGLV3-27P01718 113 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 CFIP05156 583 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 HMGA1P17096 107 aaKnown RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF7P17097 686 aaPredicted RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 CR2P20023 1033 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 BDNFP23560 247 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 DGKAP23743 735 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 SOX6P35712 828 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 KRT20P35900 424 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 CASP2P42575 452 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 NEK2P51955 445 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 FOXA1P55317 472 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 C21orf58P58505 322 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 RAC3P60763 192 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 IL5RAQ01344 420 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 DSC2Q02487 901 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 EMX1Q04741 257 aaPredicted RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 CACNG1Q06432 222 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 SLC10A7Q0GE19 358 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 CSTF3Q12996 717 aaKnown RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 SLC14A1Q13336 389 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 GTF2H2Q13888 395 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 VEZF1Q14119 521 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 SPCS2Q15005 226 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 KIAA0040Q15053 153 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 TSNQ15631 228 aaKnown RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF77Q15935 545 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 PHKG1Q16816 387 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 AP5B1Q2VPB7 878 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 GGTA1PQ4G0N0 100 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 INO80DQ53TQ3 878 aaPredicted RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 EOGTQ5NDL2 527 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 C10orf62Q5T681 223 aaPredicted RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 KIAA1614Q5VZ46 1190 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 OR2T5Q6IEZ7 315 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF544Q6NX49 715 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 GTF2H2CQ6P1K8 395 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 SPESP1Q6UW49 350 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 IL27RAQ6UWB1 636 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 GLT6D1Q7Z4J2 308 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 PIM3Q86V86 326 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 TRIM69Q86WT6 500 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 CALHM3Q86XJ0 350 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 KRT73Q86Y46 540 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 C1orf52Q8N6N3 182 aaKnown RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 OR2T29Q8NH02 315 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 MCFD2Q8NI22 146 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 MCOLN3Q8TDD5 553 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 BLOC1S5Q8TDH9 187 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 RLN3Q8WXF3 142 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 ATL1Q8WXF7 558 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 ADAMTS14Q8WXS8 1223 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 FIG4Q92562 907 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 GTF2H4Q92759 462 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 PROX1Q92786 737 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 SLC38A4Q969I6 547 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 NCLNQ969V3 563 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 FBXL8Q96CD0 374 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 TMCO6Q96DC7 493 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 ZHX1-C8orf76Q96EF9 292 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 FAM120BQ96EK7 910 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms