RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 ATRXP46100 2492 aa8.71□□□□□ -1.01
CHD8-206ENST00000553870 WDR91A4D1P6 747 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 A8MUI8 341 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 HMGB1P1B2RPK0 211 aaPredicted RBP8.71□□□□□ -1.02
CHD8-206ENST00000553870 PGRMC2O15173 223 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 SEC22BO75396 215 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 PRB1P04280 392 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 UQCRHP07919 91 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 CELA2AP08217 269 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 ANXA4P09525 319 aaPredicted RBP8.71□□□□□ -1.02
CHD8-206ENST00000553870 PORP16435 677 aaPredicted RBP8.71□□□□□ -1.02
CHD8-206ENST00000553870 PCSK2P16519 638 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 CSNK2A2P19784 350 aaPredicted RBP8.71□□□□□ -1.02
CHD8-206ENST00000553870 NR1D1P20393 614 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 SLC1A6P48664 564 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 XKP51811 444 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 WDR4P57081 412 aaKnown RBP8.71□□□□□ -1.02
CHD8-206ENST00000553870 MLF1P58340 268 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 RAE1P78406 368 aaKnown RBP8.71□□□□□ -1.02
CHD8-206ENST00000553870 ARG2P78540 354 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 BTKQ06187 659 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 SPRED3Q2MJR0 410 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 SMU1Q2TAY7 513 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 SH2D4BQ5SQS7 431 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 ATG16L1Q676U5 607 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 B3GNTL1Q67FW5 361 aaPredicted RBP8.71□□□□□ -1.02
CHD8-206ENST00000553870 RPUSD3Q6P087 351 aaKnown RBP8.71□□□□□ -1.02
CHD8-206ENST00000553870 SCIMPQ6UWF3 145 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 HSDL2Q6YN16 418 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 IKBIPQ70UQ0 350 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 PTRH1Q86Y79 214 aaKnown RBP8.71□□□□□ -1.02
CHD8-206ENST00000553870 OR4N5Q8IXE1 308 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 SIRT6Q8N6T7 355 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 C16orf78Q8WTQ4 265 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 TWIST2Q8WVJ9 160 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 RIT1Q92963 219 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 SENP5Q96HI0 755 aaPredicted RBP8.71□□□□□ -1.02
CHD8-206ENST00000553870 PPP3R2Q96LZ3 170 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 ACBD3Q9H3P7 528 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 TUBB1Q9H4B7 451 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 SLAMF7Q9NQ25 335 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 TEX10Q9NXF1 929 aaPredicted RBP8.71□□□□□ -1.02
CHD8-206ENST00000553870 TAS2R7Q9NYW3 318 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 COPS7AQ9UBW8 275 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 ZDHHC2Q9UIJ5 367 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 DLGAP4Q9Y2H0 992 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 RAP2CQ9Y3L5 183 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 PCDHGB6Q9Y5F9 930 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 ZNF780BQ9Y6R6 833 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 SPTA1P02549 2419 aa8.71□□□□□ -1.02
CHD8-206ENST00000553870 TLN1Q9Y490 2541 aaKnown RBP8.71□□□□□ -1.02
CHD8-206ENST00000553870 TRAV17A0A0B4J275 112 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 OR5H15A6NDH6 313 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 GLOD5A6NK44 160 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 OR6C76A6NM76 312 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 FCHO1O14526 889 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 KLF11O14901 512 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 OR10H2O60403 315 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 LINC00032P0C843 101 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 CPMP14384 443 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 DDX5P17844 614 aaKnown RBP8.7□□□□□ -1.02
CHD8-206ENST00000553870 BGNP21810 368 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 MAPK1P28482 360 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 ARRB2P32121 409 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 TRHRP34981 398 aaPredicted RBP8.7□□□□□ -1.02
CHD8-206ENST00000553870 TNFSF10P50591 281 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 RPL14P50914 215 aaKnown RBP8.7□□□□□ -1.02
CHD8-206ENST00000553870 ID2Q02363 134 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 ZNF763Q0D2J5 394 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 ZNF169Q14929 603 aaPredicted RBP8.7□□□□□ -1.02
CHD8-206ENST00000553870 NADK2Q4G0N4 442 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 SLC6A19Q695T7 634 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 NOXRED1Q6NXP6 359 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 LINC00696Q6ZRV3 163 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 LRRC34Q8IZ02 419 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 HORMAD2Q8N7B1 307 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 ANKRD42Q8N9B4 389 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 SUN3Q8TAQ9 357 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 NUBPLQ8TB37 319 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.7□□□□□ -1.02
CHD8-206ENST00000553870 SLC2A12Q8TD20 617 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 ZNF721Q8TF20 911 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 NCLNQ969V3 563 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 ARL8AQ96BM9 186 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 ERP27Q96DN0 273 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 ZNF764Q96H86 408 aaPredicted RBP8.7□□□□□ -1.02
CHD8-206ENST00000553870 FBXL20Q96IG2 436 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 FCRL1Q96LA6 429 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 PAIP2Q9BPZ3 127 aaKnown RBP8.7□□□□□ -1.02
CHD8-206ENST00000553870 OR8D2Q9GZM6 311 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 CDCP1Q9H5V8 836 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 TRIM45Q9H8W5 580 aaPredicted RBP8.7□□□□□ -1.02
CHD8-206ENST00000553870 CXorf21Q9HAI6 301 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 ZBTB20Q9HC78 741 aaPredicted RBP8.7□□□□□ -1.02
CHD8-206ENST00000553870 MYNNQ9NPC7 610 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 GIMAP4Q9NUV9 329 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 THAP1Q9NVV9 213 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 YARS2Q9Y2Z4 477 aaKnown RBP8.7□□□□□ -1.02
CHD8-206ENST00000553870 FIS1Q9Y3D6 152 aa8.7□□□□□ -1.02
CHD8-206ENST00000553870 CNTRLQ7Z7A1 2325 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms