RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 GPATCH11Q8N954 259 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 CAMKVQ8NCB2 501 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 NFAM1Q8NET5 270 aaPredicted RBP4.72□□□□□ -1.65
CKAP4-203ENST00000553039 B3GNT7Q8NFL0 401 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 OR5L2Q8NGL0 311 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.72□□□□□ -1.65
CKAP4-203ENST00000553039 SMPDL3AQ92484 453 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 CAVIN3Q969G5 261 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 LRRC45Q96CN5 670 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 FOXRED1Q96CU9 486 aaPredicted RBP4.72□□□□□ -1.65
CKAP4-203ENST00000553039 VMP1Q96GC9 406 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 PEX11GQ96HA9 241 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 IL17FQ96PD4 163 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 FCRL5Q96RD9 977 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 VAT1Q99536 393 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 WDR83Q9BRX9 315 aaKnown RBP4.72□□□□□ -1.65
CKAP4-203ENST00000553039 NAT10Q9H0A0 1025 aaKnown RBP4.72□□□□□ -1.65
CKAP4-203ENST00000553039 SH2D2AQ9NP31 389 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 ADAP2Q9NPF8 381 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 FANCFQ9NPI8 374 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 ERVK13-1Q9NX77 482 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 TUBA8Q9NY65 449 aaPredicted RBP4.72□□□□□ -1.65
CKAP4-203ENST00000553039 AIPL1Q9NZN9 384 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 SPRR3Q9UBC9 169 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 MYOTQ9UBF9 498 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 PACSIN3Q9UKS6 424 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 TTC7AQ9ULT0 858 aaPredicted RBP4.72□□□□□ -1.65
CKAP4-203ENST00000553039 CAMK2AQ9UQM7 478 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 HEY1Q9Y5J3 304 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 SLC22A7Q9Y694 548 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 CPAMD8Q8IZJ3 1885 aa4.72□□□□□ -1.65
CKAP4-203ENST00000553039 DYSFO75923 2080 aa4.71□□□□□ -1.65
CKAP4-203ENST00000553039 TRBV5-4A0A0C4DH59 114 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 SYNDIG1LA6NDD5 238 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 FRG2CA6NGY1 282 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 LRRC14BA6NHZ5 514 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 CCDC154A6NI56 674 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 A8MUA0 341 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 FAM157AC9JC47 383 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 G3V3Y1 287 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 PSMD12O00232 456 aaPredicted RBP4.71□□□□□ -1.66
CKAP4-203ENST00000553039 CDC123O75794 336 aaPredicted RBP4.71□□□□□ -1.66
CKAP4-203ENST00000553039 ANXA9O76027 345 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 OR6B1O95007 311 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 AGTP01019 485 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 CRHP06850 196 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 CLEC2LP0C7M8 214 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 ITGA2P17301 1181 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 TBXA2RP21731 343 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 FPR2P25090 351 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 SRP14P37108 136 aaKnown RBP4.71□□□□□ -1.66
CKAP4-203ENST00000553039 KCNJ5P48544 419 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 DNASE1L1P49184 302 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 CSE1LP55060 971 aaKnown RBP4.71□□□□□ -1.66
CKAP4-203ENST00000553039 CORO7P57737 925 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 DUSP8Q13202 625 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 GRB7Q14451 532 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 ARHGAP19Q14CB8 494 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 NOMO1Q15155 1222 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 TMED2Q15363 201 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 NRF1Q16656 503 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 FBLN7Q53RD9 439 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 XKR6Q5GH73 641 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 THEMIS2Q5TEJ8 643 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 HLA-DQA1Q5Y7H0 255 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 ADAM5Q6NVV9 412 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 CLEC2AQ6UVW9 174 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 HSDL2Q6YN16 418 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF704Q6ZNC4 412 aaPredicted RBP4.71□□□□□ -1.66
CKAP4-203ENST00000553039 DNM1P46Q6ZS02 220 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 ADCK2Q7Z695 626 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 ARIH2OSQ8N7S6 290 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 RNF152Q8N8N0 203 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 CCDC89Q8N998 374 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 MLKLQ8NB16 471 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 IPMKQ8NFU5 416 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 NEK11Q8NG66 645 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 OR10H5Q8NGA6 315 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 GABPB2Q8TAK5 448 aaPredicted RBP4.71□□□□□ -1.66
CKAP4-203ENST00000553039 SKA2Q8WVK7 121 aaPredicted RBP4.71□□□□□ -1.66
CKAP4-203ENST00000553039 PROX1Q92786 737 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 TSLPQ969D9 159 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 TRIM63Q969Q1 353 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 INTS12Q96CB8 462 aaKnown RBP4.71□□□□□ -1.66
CKAP4-203ENST00000553039 ZC3HAV1LQ96H79 300 aaKnown RBP4.71□□□□□ -1.66
CKAP4-203ENST00000553039 RNF157Q96PX1 679 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 ACAT2Q9BWD1 397 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 CDADC1Q9BWV3 514 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 CARD6Q9BX69 1037 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 CD244Q9BZW8 370 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 L2HGDHQ9H9P8 463 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 LANCL2Q9NS86 450 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 TMEM184CQ9NVA4 438 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 ANO10Q9NW15 660 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 CNIH4Q9P003 139 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 SPATA7Q9P0W8 599 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 MYO1AQ9UBC5 1043 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 PCYOX1Q9UHG3 505 aa4.71□□□□□ -1.66
CKAP4-203ENST00000553039 FEZ2Q9UHY8 353 aaPredicted RBP4.71□□□□□ -1.66
CKAP4-203ENST00000553039 LIPT1Q9Y234 373 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms