RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 TSSK6Q9BXA6 273 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 ZDHHC6Q9H6R6 413 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 ZDHHC4Q9NPG8 344 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 FAM240BA0A1B0GVZ2 78 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 TMEM202A6NGA9 273 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 RFXAPO00287 272 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 RHOP08100 348 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 HLA-FP30511 346 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 CSTF2P33240 577 aaKnown RBP eCLIP11.77□□□□□ -0.53
HDAC7-230ENST00000552960 CRYBB2P43320 205 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 SLC6A12P48065 614 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 HNMTP50135 292 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.77□□□□□ -0.53
HDAC7-230ENST00000552960 MESP2Q0VG99 397 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 NUMA1Q14980 2115 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 TATDN3Q17R31 274 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 GGTA1PQ4G0N0 100 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 CRTC2Q53ET0 693 aaPredicted RBP11.77□□□□□ -0.53
HDAC7-230ENST00000552960 ATAT1Q5SQI0 421 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 CHST9Q7L1S5 443 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 ZNF557Q8N988 423 aaPredicted RBP11.77□□□□□ -0.53
HDAC7-230ENST00000552960 C7orf57Q8NEG2 295 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 MAP6Q96JE9 813 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 TM9SF2Q99805 663 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 MAPKAP1Q9BPZ7 522 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 MTG2Q9H4K7 406 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 SLA2Q9H6Q3 261 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 STMN3Q9NZ72 180 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 SEC14L4Q9UDX3 406 aa11.77□□□□□ -0.53
HDAC7-230ENST00000552960 A0A0B4J293 547 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 C5orf58C9J3I9 102 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 ZNF821O75541 412 aaPredicted RBP11.76□□□□□ -0.53
HDAC7-230ENST00000552960 CBLP22681 906 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 SERPINA4P29622 427 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 GSTM5P46439 218 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 BDKRB1P46663 353 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 TARDBPQ13148 414 aaKnown RBP eCLIP11.76□□□□□ -0.535e-10■■■■■ 38.5
HDAC7-230ENST00000552960 OR2G6Q5TZ20 316 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 SHFQ7M4L6 423 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 C2orf73Q8N5S3 287 aaPredicted RBP11.76□□□□□ -0.53
HDAC7-230ENST00000552960 DEDD2Q8WXF8 326 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 RNF31Q96EP0 1072 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 C2orf49Q9BVC5 232 aaPredicted RBP11.76□□□□□ -0.53
HDAC7-230ENST00000552960 UCK2Q9BZX2 261 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 STUB1Q9UNE7 303 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 SATB2Q9UPW6 733 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 TRAPPC4Q9Y296 219 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 TRBV5-4A0A0C4DH59 114 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 ANKDD1BA6NHY2 528 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 NEDD8-MDP1E9PL57 170 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 PRMT3O60678 531 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 PSIP1O75475 530 aaKnown RBP11.76□□□□□ -0.53
HDAC7-230ENST00000552960 ASMTP46597 345 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 RAE1P78406 368 aaKnown RBP11.76□□□□□ -0.53
HDAC7-230ENST00000552960 SYTL3Q4VX76 610 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 TJAP1Q5JTD0 557 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 TRIM40Q6P9F5 258 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 AGTRAPQ6RW13 159 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 RNF165Q6ZSG1 346 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 RBM45Q8IUH3 476 aaKnown RBP11.76□□□□□ -0.53
HDAC7-230ENST00000552960 MMP21Q8N119 569 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 OR7G3Q8NG95 312 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 RAB8BQ92930 207 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 PPCDCQ96CD2 204 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 RACGAP1Q9H0H5 632 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 WNT6Q9Y6F9 365 aa11.76□□□□□ -0.53
HDAC7-230ENST00000552960 ZNF670-ZNF695F2Z2N8 137 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 TNRC18O15417 2968 aaPredicted RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 CBSLP0DN79 551 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 UQCRC1P31930 480 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 CBSP35520 551 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 CSNK1DP48730 415 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 XKP51811 444 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 ZNF91Q05481 1191 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 IL18Q14116 193 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 EFR3AQ14156 821 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 YIF1BQ5BJH7 314 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 DDI2Q5TDH0 399 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 SAXO2Q658L1 398 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 DPY19L3Q6ZPD9 716 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 NELL2Q99435 816 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 MND1Q9BWT6 205 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 POLR2J3Q9H1A7 115 aaKnown RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 CHST8Q9H2A9 424 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 FAM83DQ9H4H8 585 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 TRIM45Q9H8W5 580 aaPredicted RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 TXNL4BQ9NX01 149 aaKnown RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 CNOT2Q9NZN8 540 aaKnown RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 NDRG2Q9UN36 371 aaKnown RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 ENPP4Q9Y6X5 453 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 SH3D21A4FU49 640 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 ZAR1LA6NP61 321 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 SLC16A8O95907 504 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 IGSF6O95976 241 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 SLC2A2P11168 524 aaPredicted RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 ATP1B2P14415 290 aaPredicted RBP11.75□□□□□ -0.53
HDAC7-230ENST00000552960 ALDH9A1P49189 494 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 LIMK1P53667 647 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 TAS2R50P59544 299 aa11.75□□□□□ -0.53
HDAC7-230ENST00000552960 FAPQ12884 760 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms