RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 ATP13A2Q9NQ11 1180 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 MS4A12Q9NXJ0 267 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 MCM8Q9UJA3 840 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 DCTN4Q9UJW0 460 aa10.69□□□□□ -0.7
TMEM116-218ENST00000552839 OTOGQ6ZRI0 2925 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 PDZD2O15018 2839 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 APCP25054 2843 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 CSMD2Q7Z408 3487 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 POLQO75417 2590 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 H3BMH7 237 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 CLDN4O14493 209 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 CHST10O43529 356 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 FOXS1O43638 330 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 B4GALT2O60909 372 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 EEDO75530 441 aaKnown RBP10.68□□□□□ -0.7
TMEM116-218ENST00000552839 CDC123O75794 336 aaPredicted RBP10.68□□□□□ -0.7
TMEM116-218ENST00000552839 TGDSO95455 350 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 HEXBP07686 556 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 UMODP07911 640 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 FAM58BPP0C7Q3 252 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 NR2F6P10588 404 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 EDN3P14138 238 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 LBPP18428 481 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 IL10P22301 178 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 EPHA3P29320 983 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 HPCAL1P37235 193 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 GSTM5P46439 218 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 ZNF763Q0D2J5 394 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 SYT16Q17RD7 645 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 XKR7Q5GH72 579 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 C6orf163Q5TEZ5 329 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 ZNF793Q6ZN11 406 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 GPR180Q86V85 440 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 PDSS2Q86YH6 399 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 PARP9Q8IXQ6 854 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 LRRC34Q8IZ02 419 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 FAM9CQ8IZT9 166 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 CA13Q8N1Q1 262 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 TMEM132CQ8N3T6 1108 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 ZCCHC7Q8N3Z6 543 aaKnown RBP10.68□□□□□ -0.7
TMEM116-218ENST00000552839 DTWD1Q8N5C7 304 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 OR5T3Q8NGG3 340 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 DNAJB14Q8TBM8 379 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 TBC1D20Q96BZ9 403 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 APIPQ96GX9 242 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 METTL2AQ96IZ6 378 aaKnown RBP10.68□□□□□ -0.7
TMEM116-218ENST00000552839 OR1F2PQ96R84 312 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 TUBB1Q9H4B7 451 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 CCDC134Q9H6E4 229 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 SOX17Q9H6I2 414 aaPredicted RBP10.68□□□□□ -0.7
TMEM116-218ENST00000552839 MEAF6Q9HAF1 191 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 LYRM4Q9HD34 91 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 MIEF1Q9NQG6 463 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 ENAMQ9NRM1 1142 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 GIMAP4Q9NUV9 329 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 NOP53Q9NZM5 478 aaKnown RBP10.68□□□□□ -0.7
TMEM116-218ENST00000552839 CTSFQ9UBX1 484 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 PKDREJQ9NTG1 2253 aa10.68□□□□□ -0.7
TMEM116-218ENST00000552839 A0A1B0GUH1 482 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 C4orf51C9J302 202 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 LSM1O15116 133 aaKnown RBP10.67□□□□□ -0.7
TMEM116-218ENST00000552839 ALOX12BO75342 701 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 MED26O95402 600 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 ALBP02768 609 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 FHP07954 510 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 PRPS2P11908 318 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 PRPH2P23942 346 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 PPP2R1BP30154 601 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 LSP1P33241 339 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 BSGP35613 385 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 ASMTP46597 345 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 ARFIP2P53365 341 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 LIM2P55344 173 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 TRA2BP62995 288 aaKnown RBP10.67□□□□□ -0.7
TMEM116-218ENST00000552839 ERVK-8P63133 956 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 TNFRSF17Q02223 184 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 STX4Q12846 297 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 SF3A3Q12874 501 aaKnown RBP eCLIP10.67□□□□□ -0.7
TMEM116-218ENST00000552839 AIMP2Q13155 320 aaKnown RBP10.67□□□□□ -0.7
TMEM116-218ENST00000552839 SLC13A2Q13183 592 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 ART3Q13508 389 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 ZNF169Q14929 603 aaPredicted RBP10.67□□□□□ -0.7
TMEM116-218ENST00000552839 HEPACAMQ14CZ8 416 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 UGT3A2Q3SY77 523 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 OR52E8Q6IFG1 317 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 NOXRED1Q6NXP6 359 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 MRPL14Q6P1L8 145 aaKnown RBP10.67□□□□□ -0.7
TMEM116-218ENST00000552839 IGFL2Q6UWQ7 119 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 SHISA6Q6ZSJ9 500 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 OVCH1Q7RTY7 1134 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 OR2T11Q8NH01 316 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 STT3BQ8TCJ2 826 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 LURAP1Q96LR2 239 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 ZBTB18Q99592 522 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 MAPKAP1Q9BPZ7 522 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 CRB3Q9BUF7 120 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 DDX31Q9H8H2 851 aaKnown RBP10.67□□□□□ -0.7
TMEM116-218ENST00000552839 AKTIPQ9H8T0 292 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 TCF7L2Q9NQB0 619 aa10.67□□□□□ -0.7
TMEM116-218ENST00000552839 PRDM7Q9NQW5 492 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms