RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 NME3Q13232 169 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 RIPK1Q13546 671 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 ZNF699Q32M78 642 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 KIAA1644Q3SXP7 199 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 RABL6Q3YEC7 729 aaPredicted RBP3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 USH1GQ495M9 461 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 ACSF3Q4G176 576 aaPredicted RBP3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 NADSYN1Q6IA69 706 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 NIPAL3Q6P499 406 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 LRRC8BQ6P9F7 803 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 C9orf139Q6ZV77 190 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 GOLGA7Q7Z5G4 137 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 CBWD2Q8IUF1 395 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 SLC22A15Q8IZD6 547 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 POC1AQ8NBT0 407 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 LMO3Q8TAP4 145 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 NUDCD2Q8WVJ2 157 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 SLC25A36Q96CQ1 311 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 OMA1Q96E52 524 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 ZNF274Q96GC6 653 aaPredicted RBP3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 MED30Q96HR3 178 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 CNDP1Q96KN2 507 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 C4orf36Q96KX1 117 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 CAPNS2Q96L46 248 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 ZNF354BQ96LW1 612 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 NKX3-1Q99801 234 aaPredicted RBP3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 ZPBPQ9BS86 351 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 DCTN5Q9BTE1 182 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 EDEM2Q9BV94 578 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 PAPOLGQ9BWT3 736 aaKnown RBP3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 PITPNM3Q9BZ71 974 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 LRRCC1Q9C099 1032 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 GDF3Q9NR23 364 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 FARSBQ9NSD9 589 aaKnown RBP3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 COX16Q9P0S2 106 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 TAAR2Q9P1P5 351 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 SNX6Q9UNH7 406 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 CHMP2BQ9UQN3 213 aa3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 DDX49Q9Y6V7 483 aaKnown RBP3.53□□□□□ -1.84
LSM6P2-201ENST00000552208 KIAA1210Q9ULL0 1709 aa3.53□□□□□ -1.85
LSM6P2-201ENST00000552208 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 A0A1B0GUV1 79 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 hCG_38984A0A1B0GV85 526 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 UBXN8O00124 270 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 SIGLEC5O15389 551 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 BUB1O43683 1085 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 CIDEAO60543 219 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 CLPTM1O96005 669 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 CHRNA1P02708 482 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 PAX7P23759 505 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 TMOD1P28289 359 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 PPP2R1AP30153 589 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 AXLP30530 894 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 LEPRP48357 1165 aaKnown RBP3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 DHPSP49366 369 aaPredicted RBP3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 LBX1P52954 281 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 KLF5Q13887 457 aaPredicted RBP3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 BTG3Q14201 252 aaPredicted RBP3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 EFTUD2Q15029 972 aaKnown RBP eCLIP3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 TAB1Q15750 504 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 CCDC152Q4G0S7 254 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 ASPHD2Q6ICH7 369 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 ZNF679Q8IYX0 411 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 MAB21L3Q8N8X9 362 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 OR5AP2Q8NGF4 316 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 OR10G8Q8NGN5 311 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 GIPC3Q8TF64 312 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 OSTF1Q92882 214 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 GIMAP5Q96F15 307 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 COG3Q96JB2 828 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 INPP4AQ96PE3 977 aaPredicted RBP3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 NLNQ9BYT8 704 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 C6orf106Q9H6K1 298 aaPredicted RBP3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 AGPAT5Q9NUQ2 364 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 ERRFI1Q9UJM3 462 aaPredicted RBP3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 MRPS7Q9Y2R9 242 aaKnown RBP3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 ZNF175Q9Y473 711 aa3.52□□□□□ -1.85
LSM6P2-201ENST00000552208 SLC1A7O00341 560 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 SH2D1BO14796 132 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 KIAA0513O60268 411 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 TSPAN2O60636 221 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 AP2A2O94973 939 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 CALCAP01258 141 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 FCER2P06734 321 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 C4BPBP20851 252 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 THBS3P49746 956 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 SGSHP51688 502 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 NDST1P52848 882 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 CDKL1Q00532 357 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 CNTN2Q02246 1040 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 POU3F1Q03052 451 aaPredicted RBP3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 ARL16Q0P5N6 197 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 NFATC2Q13469 925 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 TRIP10Q15642 601 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 PDK4Q16654 411 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 DCAF4L1Q3SXM0 396 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 ACCSLQ4AC99 568 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 LRRC23Q53EV4 343 aaPredicted RBP3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 ZNF311Q5JNZ3 666 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms