RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 WDR34Q96EX3 536 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 FBXL20Q96IG2 436 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 ZNF597Q96LX8 424 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 KRT12Q99456 494 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 YIPF4Q9BSR8 244 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 DOHHQ9BU89 302 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 PLAC1Q9HBJ0 212 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 POPDC3Q9HBV1 291 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 ZNF490Q9ULM2 529 aaPredicted RBP13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 JRKLQ9Y4A0 524 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 CHCHD2Q9Y6H1 151 aaPredicted RBP13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 IQANK1A0A1B0GTG1 560 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 FAM171A2A8MVW0 826 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 FGF17O60258 216 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 STK16O75716 305 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 TRAPPC6AO75865 159 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 HIST1H1TP22492 207 aaPredicted RBP13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 HOXC12P31275 282 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 GGT5P36269 586 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 SSR2P43308 183 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 RPL21P46778 160 aaKnown RBP13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 SLC12A2P55011 1212 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 TAS2R39P59534 338 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 DCAF7P61962 342 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 IGLV3-21P80748 117 aaPredicted RBP13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 DUSP8Q13202 625 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 FRG1Q14331 258 aaKnown RBP13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 PCBP2Q15366 365 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 CDKL4Q5MAI5 379 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 HP1BP3Q5SSJ5 553 aaPredicted RBP13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 TMEM198Q66K66 360 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 STEAP4Q687X5 459 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 LYPD8Q6UX82 237 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 ZNF793Q6ZN11 406 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 CHSY3Q70JA7 882 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 ZC3HC1Q86WB0 502 aaKnown RBP13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 BBOF1Q8ND07 529 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 ANKRD49Q8WVL7 239 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 UBE2E3Q969T4 207 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 LRRC39Q96DD0 335 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 GAL3ST4Q96RP7 486 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 SMR3AQ99954 134 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 TMEM79Q9BSE2 394 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 PHACTR1Q9C0D0 580 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 BEX4Q9NWD9 120 aaPredicted RBP13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 TRMT1Q9NXH9 659 aaKnown RBP13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 MS4A12Q9NXJ0 267 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 PSAT1Q9Y617 370 aa13.03□□□□□ -0.32
CHMP1A-210ENST00000551981 ANKRD33BA6NCL7 494 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 CLCA1A8K7I4 914 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 EEF1E1-BLOC1S5C9J1V9 151 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 RTCAO00442 366 aaKnown RBP13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 TP53I11O14683 189 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 TAPBPO15533 448 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 EEF1E1O43324 174 aaKnown RBP13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 SCELO95171 688 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 C1QAP02745 245 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 SERPINB1P30740 379 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 TLX1P31314 330 aaPredicted RBP13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 OPRM1P35372 400 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 ZNF136P52737 540 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 WNT3P56703 355 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 IRF8Q02556 426 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 CRYZQ08257 329 aaKnown RBP13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 MGAT5Q09328 741 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 ILF2Q12905 390 aaKnown RBP13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 SHEQ5VZ18 495 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 NSUN5P2Q63ZY6 315 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 SULT1C3Q6IMI6 304 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 POMZP3Q6PJE2 187 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 RNF111Q6ZNA4 994 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 UBE3DQ7Z6J8 389 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 GPSM1Q86YR5 675 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 OR4N5Q8IXE1 308 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 TAGAPQ8N103 731 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 LINC01560Q8TB33 94 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 ACTRT1Q8TDG2 376 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 TANKQ92844 425 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 PPWD1Q96BP3 646 aaKnown RBP13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 TIMP4Q99727 224 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 PELOQ9BRX2 385 aaKnown RBP13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 MS4A8Q9BY19 250 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 DERL2Q9GZP9 239 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 WWTR1Q9GZV5 400 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 PRDM14Q9GZV8 571 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 RPF2Q9H7B2 306 aaKnown RBP13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 PLEKHF2Q9H8W4 249 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 PROK2Q9HC23 129 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 NSMCE4AQ9NXX6 385 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 CNOT11Q9UKZ1 510 aaKnown RBP13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 CAMK2AQ9UQM7 478 aa13.02□□□□□ -0.33
CHMP1A-210ENST00000551981 OR6C76A6NM76 312 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 CAPN14A8MX76 684 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 HRKO00198 91 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 PRAMEF4O60810 478 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 TRIM3O75382 744 aaPredicted RBP13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 LRATO95237 230 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 S100BP04271 92 aaPredicted RBP13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 HEXAP06865 529 aa13.01□□□□□ -0.33
CHMP1A-210ENST00000551981 ALOX15P16050 662 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms