RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ISCUQ9H1K1 167 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 NDST4Q9H3R1 872 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 TMPRSS5Q9H3S3 457 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 KLHL31Q9H511 634 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 UCK1Q9HA47 277 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 UPF2Q9HAU5 1272 aaKnown RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ZBTB20Q9HC78 741 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 PDE7BQ9NP56 450 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 UBE2TQ9NPD8 197 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF71Q9NQZ8 489 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 CYSLTR2Q9NS75 346 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 GIMAP4Q9NUV9 329 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ETNK2Q9NVF9 386 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 TAS2R14Q9NYV8 317 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 CISD1Q9NZ45 108 aaKnown RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 CWC15Q9P013 229 aaKnown RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ABI3Q9P2A4 366 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF624Q9P2J8 865 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 EPHA6Q9UF33 1036 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 FZD10Q9ULW2 581 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 R3HDM2Q9Y2K5 976 aaKnown RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 PAM16Q9Y3D7 125 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 HRNRQ86YZ3 2850 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 CNTRLQ7Z7A1 2325 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ANK3Q12955 4377 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ZFC3H1O60293 1989 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 DOCK4Q8N1I0 1966 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 LOC100509620A0A075B734 347 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 TMEM272A0A1B0GTI8 110 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 LILRA5A6NI73 299 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 SIGLEC16A6NMB1 481 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 EIF4E1BA6NMX2 242 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 A8MV72 311 aaPredicted RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 KDM4EB2RXH2 506 aaPredicted RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 F8VZ95 297 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 MS4A18H0YCH9 400 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ITM2AO43736 263 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 STX10O60499 249 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 JRKO75564 520 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ERAL1O75616 437 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 TM7SF2O76062 418 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 STK17BO94768 372 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 NDUFB8O95169 186 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 MOCS3O95396 460 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 APOEP02649 317 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 CYP1A2P05177 515 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 RHOCP08134 193 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ALPIP09923 528 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ALPPL2P10696 532 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 EPB41P11171 864 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 KRT13P13646 458 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 FOLR1P15328 257 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 UCHL3P15374 230 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ARSBP15848 533 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF18P17022 549 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 DDX5P17844 614 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 XRCC1P18887 633 aaPredicted RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 PSMA3P25788 255 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 TNFRSF8P28908 595 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 DCTDP32321 178 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 SLC15A1P46059 708 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 LEPRP48357 1165 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 HCAR3P49019 387 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 KLK7P49862 253 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 RASSF2P50749 326 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 EFNA3P52797 238 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 STC1P52823 247 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 GFERP55789 205 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 KRTAP10-9P60411 292 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 YWHAEP62258 255 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 KRT83P78385 493 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 SLC10A7Q0GE19 358 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 KLRB1Q12918 225 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 NME3Q13232 169 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ELOCQ15369 112 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 RBMS2Q15434 407 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 NTRK2Q16620 822 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ASTE1Q2TB18 679 aaPredicted RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 PCGF3Q3KNV8 242 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 KRTAP15-1Q3LI76 137 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ACCSLQ4AC99 568 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 MTX3Q5HYI7 312 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 FAM182AQ5T1J6 154 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 HENMT1Q5T8I9 393 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 FAM69BQ5VUD6 431 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 MORN5Q5VZ52 161 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 PLEKHA7Q6IQ23 1121 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 SLC30A6Q6NXT4 461 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 METTL2BQ6P1Q9 378 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 DUS1LQ6P1R4 473 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 BRAT1Q6PJG6 821 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ENPP7Q6UWV6 458 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ABRAXAS1Q6UWZ7 409 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 WASH2PQ6VEQ5 465 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 SPNS3Q6ZMD2 512 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 CERS6Q6ZMG9 384 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 QSOX2Q6ZRP7 698 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 RBM43Q6ZSC3 357 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 PRSS42Q7Z5A4 293 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms