RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 ACTL7BQ9Y614 415 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 COPG1Q9Y678 874 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 PTPN13Q12923 2485 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 MYOCOSA0A1B0GUC4 107 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 GLOD5A6NK44 160 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 VPS4BO75351 444 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 RSL1D1O76021 490 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 DDAH2O95865 285 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 F10P00742 488 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 SLC35E2P0CK97 266 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 CREB1P16220 341 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 TIA1P31483 386 aaKnown RBP eCLIP14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 ETV4P43268 484 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 GSTM5P46439 218 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 HMGCS1Q01581 520 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 OR1C1Q15619 314 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 SLC48A1Q6P1K1 146 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 HSDL2Q6YN16 418 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 RNF165Q6ZSG1 346 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 TRIM46Q7Z4K8 759 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 HORMAD2Q8N7B1 307 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 MDS2Q8NDY4 140 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 C11orf24Q96F05 449 aaPredicted RBP14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 FBXL20Q96IG2 436 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 FAIM2Q9BWQ8 316 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 OR8D2Q9GZM6 311 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 ASF1BQ9NVP2 202 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 VPS4AQ9UN37 437 aa14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 RP1L1Q8IWN7 2480 aaPredicted RBP14.35□□□□□ -0.11
PRPF40B-211ENST00000551063 MAST4O15021 2626 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 NPIPB8E9PQR5 432 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 AZIN1O14977 448 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 CTIFO43310 598 aaKnown RBP14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 PCDH7O60245 1069 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 OR10H2O60403 315 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 IGKV3-11P04433 115 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 MYZAPP0CAP1 466 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 PIK3R1P27986 724 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 CD96P40200 585 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 HLCSP50747 726 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 OC90Q02509 493 aaPredicted RBP14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 IMPG1Q17R60 797 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 ZNF766Q5HY98 468 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 BEND6Q5SZJ8 279 aaPredicted RBP14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 FAM180AQ6UWF9 173 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 EXOC3L1Q86VI1 746 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 OR4K14Q8NGD5 310 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 OR5L2Q8NGL0 311 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 ZNF721Q8TF20 911 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 TM4SF18Q96CE8 201 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 SCMH1Q96GD3 660 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 APIPQ96GX9 242 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 METTL2AQ96IZ6 378 aaKnown RBP14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 MECRQ9BV79 373 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 EML4Q9HC35 981 aaKnown RBP14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 TNFRSF12AQ9NP84 129 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 RRAGDQ9NQL2 400 aaPredicted RBP14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 LRFN1Q9P244 771 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 MAP10Q9P2G4 905 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 NTNG1Q9Y2I2 539 aa14.34□□□□□ -0.11
PRPF40B-211ENST00000551063 CPAMD8Q8IZJ3 1885 aa14.33□□□□□ -0.11
PRPF40B-211ENST00000551063 GOLGA6L10A6NI86 522 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 PGRMC2O15173 223 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 TM9SF1O15321 606 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 PRKNO60260 465 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 ITGA10O75578 1167 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 BPGMP07738 259 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 NEFHP12036 1026 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 GP1BBP13224 206 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 CD46P15529 392 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 PRPH2P23942 346 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 SERPINB3P29508 390 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 CYB561P49447 251 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 RNF4P78317 190 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 RAE1P78406 368 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 KANK2Q63ZY3 851 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 SCIMPQ6UWF3 145 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 GPALPP1Q8IXQ4 340 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 BCORP1Q8N888 145 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 TMEM178AQ8NBL3 297 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 FAM76AQ8TAV0 307 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 NUBPLQ8TB37 319 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 GRHL3Q8TE85 626 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 RIT1Q92963 219 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 PPWD1Q96BP3 646 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 C19orf60Q96EN9 201 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 SENP5Q96HI0 755 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 C5orf34Q96MH7 638 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 SHCBP1LQ9BZQ2 653 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 STMN4Q9H169 189 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 CENPHQ9H3R5 247 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 RYDENQ9NUL5 291 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 ANKRD10Q9NXR5 420 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 MYOTQ9UBF9 498 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 CES1P1Q9UKY3 287 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 PSME2Q9UL46 239 aa14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 YARS2Q9Y2Z4 477 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-211ENST00000551063 GNG14A0A1W2PPG7 69 aa14.32□□□□□ -0.12
PRPF40B-211ENST00000551063 TMEM200CA6NKL6 621 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms