RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 EXOC6BQ9Y2D4 811 aa4.19□□□□□ -1.74
LIMA1-205ENST00000550592 ARFGEF2Q9Y6D5 1785 aa4.19□□□□□ -1.74
LIMA1-205ENST00000550592 ZNF609O15014 1411 aa4.19□□□□□ -1.74
LIMA1-205ENST00000550592 TONSLQ96HA7 1378 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 CCDC162PA2VCL2 907 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 NPIPB9F8W1W9 429 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 SURF4O15260 269 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 P2RX6O15547 441 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 SYT7O43581 403 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 NXPH2O95156 264 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 IGHEP01854 428 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 ODC1P11926 461 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 CPA3P15088 417 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 STMN1P16949 149 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 CYP3A5P20815 502 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 EDNRAP25101 427 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 FEN1P39748 380 aaKnown RBP4.18□□□□□ -1.74
LIMA1-205ENST00000550592 PRMT2P55345 433 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 IRX4P78413 519 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 CNTN1Q12860 1018 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 LCP2Q13094 533 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 TMEM187Q14656 261 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 SPANXN4Q5MJ08 99 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 WLSQ5T9L3 541 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 RFPL4BQ6ZWI9 263 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 CYP4V2Q6ZWL3 525 aaPredicted RBP4.18□□□□□ -1.74
LIMA1-205ENST00000550592 ZNF410Q86VK4 478 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 CATSPERDQ86XM0 798 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 PEX5LQ8IYB4 626 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 SIDT2Q8NBJ9 832 aaKnown RBP4.18□□□□□ -1.74
LIMA1-205ENST00000550592 HCAR2Q8TDS4 363 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 COG3Q96JB2 828 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 OVOL2Q9BRP0 275 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 PAPOLGQ9BWT3 736 aaKnown RBP4.18□□□□□ -1.74
LIMA1-205ENST00000550592 MTIF3Q9H2K0 278 aaKnown RBP4.18□□□□□ -1.74
LIMA1-205ENST00000550592 FNDC4Q9H6D8 234 aaPredicted RBP4.18□□□□□ -1.74
LIMA1-205ENST00000550592 PRMT8Q9NR22 394 aaPredicted RBP4.18□□□□□ -1.74
LIMA1-205ENST00000550592 DBF4Q9UBU7 674 aaPredicted RBP4.18□□□□□ -1.74
LIMA1-205ENST00000550592 CACNG5Q9UF02 275 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 PSORS1C1Q9UIG5 152 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 PILRAQ9UKJ1 303 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 KCNK6Q9Y257 313 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 TEX264Q9Y6I9 313 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 CSNK1G3Q9Y6M4 447 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 PTPRZ1P23471 2315 aaPredicted RBP4.18□□□□□ -1.74
LIMA1-205ENST00000550592 UMODL1Q5DID0 1318 aa4.18□□□□□ -1.74
LIMA1-205ENST00000550592 RTL1A6NKG5 1358 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 ATP6AP2A0A1C7CYW4 349 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 SLC15A5A6NIM6 579 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 SRRM4A7MD48 611 aaKnown RBP4.17□□□□□ -1.74
LIMA1-205ENST00000550592 LMO7DNF2Z398 122 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 LINC01565O15544 149 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 GRID2O43424 1007 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 ZBTB14O43829 449 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 ECE2O60344 883 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 PRDM1O75626 825 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 CLDN1O95832 211 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 SKILP12757 684 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 C4BPBP20851 252 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 ACKR3P25106 362 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 CCR4P51679 360 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 YBEYP58557 167 aaPredicted RBP4.17□□□□□ -1.74
LIMA1-205ENST00000550592 CYCSP99999 105 aaKnown RBP4.17□□□□□ -1.74
LIMA1-205ENST00000550592 GABPAQ06546 454 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 ZFP69Q49AA0 526 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 TATDN1Q6P1N9 297 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 CHMP1BQ7LBR1 199 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 RABEPKQ7Z6M1 372 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 NBPF5PQ86XG9 351 aaPredicted RBP4.17□□□□□ -1.74
LIMA1-205ENST00000550592 DND1Q8IYX4 353 aaKnown RBP4.17□□□□□ -1.74
LIMA1-205ENST00000550592 FBXW8Q8N3Y1 598 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 ARL10Q8N8L6 244 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 ADAD2Q8NCV1 583 aaKnown RBP4.17□□□□□ -1.74
LIMA1-205ENST00000550592 OR13C5Q8NGS8 318 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 SPATA18Q8TC71 538 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 U2AF1L4Q8WU68 220 aaKnown RBP4.17□□□□□ -1.74
LIMA1-205ENST00000550592 UBE2Q2Q8WVN8 375 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 HAS2Q92819 552 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 SLCO2A1Q92959 643 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 SYT15Q9BQS2 421 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 TRIM7Q9C029 511 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 THAP9Q9H5L6 903 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 MED20Q9H944 212 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 AKAP7Q9P0M2 348 aaPredicted RBP4.17□□□□□ -1.74
LIMA1-205ENST00000550592 KLHL8Q9P2G9 620 aaPredicted RBP4.17□□□□□ -1.74
LIMA1-205ENST00000550592 ERVK-19Q9WJR5 959 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 ETV7Q9Y603 341 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 MUC3AQ02505 3323 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 FAM205AQ6ZU69 1335 aa4.17□□□□□ -1.74
LIMA1-205ENST00000550592 NOTCH4Q99466 2003 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 PSMD3O43242 534 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 TLX2O43763 284 aaPredicted RBP4.16□□□□□ -1.74
LIMA1-205ENST00000550592 LRCH4O75427 683 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 ZNF821O75541 412 aaPredicted RBP4.16□□□□□ -1.74
LIMA1-205ENST00000550592 GAS8O95995 478 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 EPOP01588 193 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 CCL5P13501 91 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 ANPEPP15144 967 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 GIFP27352 417 aa4.16□□□□□ -1.74
LIMA1-205ENST00000550592 HOXD10P28358 340 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms