RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, human

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR4A1-215	ENST00000550557	NKIRAS2	Q9NYR9	191 aa		11.64	□□□□□ -0.55
NR4A1-215	ENST00000550557	PRRT4	C9JH25	899 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	HTRA2	O43464	458 aa	Predicted RBP	11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	RDH16	O75452	317 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	CLCN2	P51788	898 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	ADPRH	P54922	357 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	ZNF423	Q2M1K9	1284 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	GALNT5	Q7Z7M9	940 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	LRRC58	Q96CX6	371 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	LRRC3	Q9BY71	257 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	ALOXE3	Q9BYJ1	711 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	STARD5	Q9NSY2	213 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	SSR3	Q9UNL2	185 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557		R4GN57	208 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	HHLA1	C9JL84	531 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	SIGLEC6	O43699	453 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	PDYN	P01213	254 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	IGFBP5	P24593	272 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	RCVRN	P35243	200 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	ARHGAP19	Q14CB8	494 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	ZNF630	Q2M218	657 aa	Predicted RBP	11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	TMEM214	Q6NUQ4	689 aa	Known RBP	11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	LARP4	Q71RC2	724 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	PEG10	Q86TG7	708 aa	Known RBP	11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	RAB2B	Q8WUD1	216 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	ABCB10	Q9NRK6	738 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	THSD1	Q9NS62	852 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	UBE2QL1	A1L167	161 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	TMEM221	A6NGB7	291 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557		M0R296	226 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	CPNE3	O75131	537 aa	Known RBP	11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	PENK	P01210	267 aa	Predicted RBP	11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	ATP4B	P51164	291 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	ARFIP1	P53367	373 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	RIN1	Q13671	783 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	GANAB	Q14697	944 aa	Known RBP	11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	ABRAXAS2	Q15018	415 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	SLC14A2	Q15849	920 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	SLC34A3	Q8N130	599 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	OR9I1	Q8NGQ6	314 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	RFK	Q969G6	155 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	OR6C1	Q96RD1	312 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	SORT1	Q99523	831 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	CGREF1	Q99674	301 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	LIN28A	Q9H9Z2	209 aa	Known RBP	11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	FGF21	Q9NSA1	209 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	PCDHGB5	Q9Y5G0	923 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	KIF13B	Q9NQT8	1826 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	TRBC2	A0A5B9	178 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	CDC14C	A4D256	554 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	IDH3B	O43837	385 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	C1S	P09871	688 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	ABO	P16442	354 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	ZNF28	P17035	718 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	PGGT1B	P53609	377 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	SRY	Q05066	204 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	ARRDC2	Q8TBH0	407 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	MRGPRX1	Q96LB2	322 aa		11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	PTBP2	Q9UKA9	531 aa	Known RBP	11.63	□□□□□ -0.55
NR4A1-215	ENST00000550557	DBT	P11182	482 aa	Known RBP	11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	CNR2	P34972	360 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	MMP12	P39900	470 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	CCR2	P41597	374 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	SPEM2	Q0P670	501 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	CARTPT	Q16568	116 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	SMU1	Q2TAY7	513 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	BICRAL	Q6AI39	1079 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	TCEAL6	Q6IPX3	200 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	EGFL6	Q8IUX8	553 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	PIANP	Q8IYJ0	282 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	SERINC2	Q96SA4	455 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	POLR2J3	Q9H1A7	115 aa	Known RBP	11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	SMURF2	Q9HAU4	748 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	ING4	Q9UNL4	249 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	MRPS7	Q9Y2R9	242 aa	Known RBP	11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	BCKDK	O14874	412 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	PRL	P01236	227 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	S100G	P29377	79 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	RPL34	P49207	117 aa	Known RBP	11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	RASGEF1B	Q0VAM2	473 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	PIGG	Q5H8A4	983 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557		Q6ZS52	159 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	TMPPE	Q6ZT21	453 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	RNF130	Q86XS8	419 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	PARP8	Q8N3A8	854 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	SVOPL	Q8N434	492 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	ARL10	Q8N8L6	244 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	NFKBID	Q8NI38	313 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	HSPBAP1	Q96EW2	488 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	TCTN2	Q96GX1	697 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	YTHDF1	Q9BYJ9	559 aa	Known RBP	11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	BLOC1S5-TXNDC5	H3BN57	136 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	NARS	O43776	548 aa	Known RBP	11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	PGC	P20142	388 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	ACVR2A	P27037	513 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	PRLHR	P49683	370 aa		11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	EEFSEC	P57772	596 aa	Known RBP	11.62	□□□□□ -0.55
NR4A1-215	ENST00000550557	UFM1	P61960	85 aa		11.62	□□□□□ -0.55

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