RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 MEP1AQ16819 746 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 KRTCAP3Q53RY4 240 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 PAGE2BQ5JRK9 111 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 TEX35Q5T0J7 233 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 KHDRBS2Q5VWX1 349 aaKnown RBP6.4□□□□□ -1.38
CBX5-204ENST00000550411 NIPAL1Q6NVV3 410 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 GTF2H2CQ6P1K8 395 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 LETMD1Q6P1Q0 360 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 MED27Q6P2C8 311 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 TRIM40Q6P9F5 258 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 Q6ZPB1 254 aaPredicted RBP6.4□□□□□ -1.38
CBX5-204ENST00000550411 SH2D5Q6ZV89 423 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 IFT20Q8IY31 132 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 BEST3Q8N1M1 668 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 ARMC10Q8N2F6 343 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 ACOT4Q8N9L9 421 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 TMEM178AQ8NBL3 297 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 FAM98AQ8NCA5 519 aaKnown RBP6.4□□□□□ -1.38
CBX5-204ENST00000550411 APCDD1LQ8NCL9 501 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 MDS2Q8NDY4 140 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 WDR20Q8TBZ3 569 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 M1APQ8TC57 530 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 ELP5Q8TE02 316 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 ZNF483Q8TF39 744 aaPredicted RBP6.4□□□□□ -1.38
CBX5-204ENST00000550411 THAP3Q8WTV1 239 aaPredicted RBP6.4□□□□□ -1.38
CBX5-204ENST00000550411 GATAD2BQ8WXI9 593 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 MAGED4Q96JG8 741 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 GPR137Q96N19 417 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 PTCHD1Q96NR3 888 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 SIGLEC12Q96PQ1 595 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 SERINC2Q96SA4 455 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 MTERF1Q99551 399 aaKnown RBP6.4□□□□□ -1.38
CBX5-204ENST00000550411 MAPKAP1Q9BPZ7 522 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 NPLQ9BXD5 320 aaPredicted RBP6.4□□□□□ -1.38
CBX5-204ENST00000550411 HES7Q9BYE0 225 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 RASSF4Q9H2L5 321 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 MRPL46Q9H2W6 279 aaKnown RBP6.4□□□□□ -1.38
CBX5-204ENST00000550411 OR51B5Q9H339 312 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 KLHL1Q9NR64 748 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 DAPP1Q9UN19 280 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 PPIEQ9UNP9 301 aaKnown RBP6.4□□□□□ -1.38
CBX5-204ENST00000550411 ZNF835Q9Y2P0 537 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 MEMO1Q9Y316 297 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 TSC22D4Q9Y3Q8 395 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 MMACHCQ9Y4U1 282 aa6.4□□□□□ -1.38
CBX5-204ENST00000550411 NIPBLQ6KC79 2804 aaeCLIP6.4□□□□□ -1.38
CBX5-204ENST00000550411 CHD3Q12873 2000 aaKnown RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 A0A0A6YYD5 115 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 A0A1W2PS29 197 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 ASPDHA6ND91 283 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 URADA6NGE7 173 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 TMEM200CA6NKL6 621 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 A8MUA0 341 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 PSMD12O00232 456 aaPredicted RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 B3GALT2O43825 422 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 TMPRSS11DO60235 418 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 UGDHO60701 494 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 PRKRAO75569 313 aaKnown RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 TGFB1P01137 390 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 AVPP01185 164 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 PCNAP12004 261 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 COL6A2P12110 1019 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 ABOP16442 354 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 TSPAN8P19075 237 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 CD33P20138 364 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 HIST1H1TP22492 207 aaPredicted RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 CNTFP26441 200 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 BSGP35613 385 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 PIK3CBP42338 1070 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 KIR3DL1P43629 444 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 NEK2P51955 445 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 HNRNPH2P55795 449 aaKnown RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 KRTAP10-9P60411 292 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 IGLV3-21P80748 117 aaPredicted RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 ID2Q02363 134 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 TUBA3CQ13748 450 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 CDSNQ15517 529 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 TERF2Q15554 542 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 EXT1Q16394 746 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 GGTA1PQ4G0N0 100 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 TMEM35AQ53FP2 167 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 TCHHL1Q5QJ38 904 aaPredicted RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 ACER2Q5QJU3 275 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 DEPDC1Q5TB30 811 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 MRM1Q6IN84 353 aaKnown RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 METTL2BQ6P1Q9 378 aaKnown RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 KLC3Q6P597 504 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 TUBA3EQ6PEY2 450 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 TAOK1Q7L7X3 1001 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 REC114Q7Z4M0 266 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 CLNKQ7Z7G1 428 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 LSRQ86X29 649 aaPredicted RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 SPPL2CQ8IUH8 684 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 ZNF595Q8IYB9 648 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 LGI4Q8N135 537 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 LILRB2Q8N423 598 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 ZNF321PQ8N8H1 164 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 EIF1ADQ8N9N8 165 aaKnown RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 ADAMTS18Q8TE60 1221 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 CHTF18Q8WVB6 975 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms