RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 EXO1Q9UQ84 846 aaKnown RBP16.11■□□□□ 0.17
BRF1-217ENST00000550375 MGAQ8IWI9 3026 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 A0A1W2PQ72 361 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 A6NL46 340 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 OR10H2O60403 315 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 CELA2AP08217 269 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 G6PDP11413 515 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 PRPS2P11908 318 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 ALOX15P16050 662 aaPredicted RBP16.1■□□□□ 0.17
BRF1-217ENST00000550375 DDCP20711 480 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 FEN1P39748 380 aaKnown RBP16.1■□□□□ 0.17
BRF1-217ENST00000550375 STT3AP46977 705 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 DIO3P55073 304 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 Q0VFX4 171 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 PTGR1Q14914 329 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 SMU1Q2TAY7 513 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 ANKRD26P1Q6NSI1 321 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 IKBIPQ70UQ0 350 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 RBM18Q96H35 190 aaKnown RBP16.1■□□□□ 0.17
BRF1-217ENST00000550375 IMMP1LQ96LU5 166 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 CCDC134Q9H6E4 229 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 NPHS2Q9NP85 383 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 ADAP2Q9NPF8 381 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 FGFR1OP2Q9NVK5 253 aa16.1■□□□□ 0.17
BRF1-217ENST00000550375 WBP11Q9Y2W2 641 aaKnown RBP16.1■□□□□ 0.17
BRF1-217ENST00000550375 ITPR1Q14643 2758 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 SAGE2PA6NJ88 616 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 C17orf105B2RV13 164 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 TGDSO95455 350 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 CPMP14384 443 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 ITGA3P26006 1051 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 ASMTP46597 345 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 IDH3AP50213 366 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 PLIN5Q00G26 463 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 AIMP2Q13155 320 aaKnown RBP16.09■□□□□ 0.17
BRF1-217ENST00000550375 RAPSNQ13702 412 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 ELAVL1Q15717 326 aaKnown RBP16.09■□□□□ 0.17
BRF1-217ENST00000550375 PRSS53Q2L4Q9 553 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 BTBD16Q32M84 506 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 DGAT2L6Q6ZPD8 337 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 APLFQ8IW19 511 aaPredicted RBP16.09■□□□□ 0.17
BRF1-217ENST00000550375 LRRC34Q8IZ02 419 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 KRTCAP2Q8N6L1 136 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 ACTRT2Q8TDY3 377 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 MAELQ96JY0 434 aaKnown RBP16.09■□□□□ 0.17
BRF1-217ENST00000550375 EBF4Q9BQW3 602 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 ASIC5Q9NY37 505 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 DCTN4Q9UJW0 460 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 G3BP2Q9UN86 482 aaKnown RBP16.09■□□□□ 0.17
BRF1-217ENST00000550375 CLCA3PQ9Y6N3 262 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 ZNF780BQ9Y6R6 833 aa16.09■□□□□ 0.17
BRF1-217ENST00000550375 POLR3GO15318 223 aaPredicted RBP16.08■□□□□ 0.16
BRF1-217ENST00000550375 ITGB2P05107 769 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 ALDOCP09972 364 aaKnown RBP16.08■□□□□ 0.16
BRF1-217ENST00000550375 SLC35E2P0CK97 266 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 COX7A2P14406 83 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 PORP16435 677 aaPredicted RBP16.08■□□□□ 0.16
BRF1-217ENST00000550375 CSNK2A2P19784 350 aaPredicted RBP16.08■□□□□ 0.16
BRF1-217ENST00000550375 PTGER1P34995 402 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 PGDP52209 483 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 SLC26A5P58743 744 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 DUSP2Q05923 314 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 SF3A3Q12874 501 aaKnown RBP eCLIP16.08■□□□□ 0.16
BRF1-217ENST00000550375 BIKQ13323 160 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 LSM12Q3MHD2 195 aaKnown RBP16.08■□□□□ 0.16
BRF1-217ENST00000550375 TMEM198Q66K66 360 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 ACAD11Q709F0 780 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 SPATA19Q7Z5L4 167 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 KBTBD2Q8IY47 623 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 ST13P4Q8IZP2 240 aaPredicted RBP16.08■□□□□ 0.16
BRF1-217ENST00000550375 GALNT16Q8N428 558 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 NFAM1Q8NET5 270 aaPredicted RBP16.08■□□□□ 0.16
BRF1-217ENST00000550375 NBEAQ8NFP9 2946 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 CEP70Q8NHQ1 597 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 RFWD2Q8NHY2 731 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 PTPMT1Q8WUK0 201 aaPredicted RBP16.08■□□□□ 0.16
BRF1-217ENST00000550375 NUDT8Q8WV74 236 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 CNRIP1Q96F85 164 aaPredicted RBP16.08■□□□□ 0.16
BRF1-217ENST00000550375 THOC3Q96J01 351 aaKnown RBP16.08■□□□□ 0.16
BRF1-217ENST00000550375 MARK4Q96L34 752 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 ARHGAP9Q9BRR9 750 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 REEP4Q9H6H4 257 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 SLC35C2Q9NQQ7 365 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 GIMAP4Q9NUV9 329 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 EHD3Q9NZN3 535 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 ENTPD4Q9Y227 616 aa16.08■□□□□ 0.16
BRF1-217ENST00000550375 SYNDIG1LA6NDD5 238 aa16.07■□□□□ 0.16
BRF1-217ENST00000550375 NT5EP21589 574 aa16.07■□□□□ 0.16
BRF1-217ENST00000550375 HPCAL1P37235 193 aa16.07■□□□□ 0.16
BRF1-217ENST00000550375 POLE2P56282 527 aa16.07■□□□□ 0.16
BRF1-217ENST00000550375 NME5P56597 212 aa16.07■□□□□ 0.16
BRF1-217ENST00000550375 EXT1Q16394 746 aa16.07■□□□□ 0.16
BRF1-217ENST00000550375 LINC00303Q3SY05 128 aa16.07■□□□□ 0.16
BRF1-217ENST00000550375 OGFOD2Q6N063 350 aa16.07■□□□□ 0.16
BRF1-217ENST00000550375 CCDC116Q8IYX3 515 aa16.07■□□□□ 0.16
BRF1-217ENST00000550375 C7orf57Q8NEG2 295 aa16.07■□□□□ 0.16
BRF1-217ENST00000550375 OR14A16Q8NHC5 309 aa16.07■□□□□ 0.16
BRF1-217ENST00000550375 PPCDCQ96CD2 204 aa16.07■□□□□ 0.16
BRF1-217ENST00000550375 BBS4Q96RK4 519 aa16.07■□□□□ 0.16
BRF1-217ENST00000550375 PELOQ9BRX2 385 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms