RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 SH2D2AQ9NP31 389 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 SEMA4BQ9NPR2 832 aaPredicted RBP12.51□□□□□ -0.41
TROAP-211ENST00000549891 RASSF1Q9NS23 344 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 ZNF358Q9NW07 568 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 SPRR3Q9UBC9 169 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 FOXD3Q9UJU5 478 aaPredicted RBP12.51□□□□□ -0.41
TROAP-211ENST00000549891 PTBP2Q9UKA9 531 aaKnown RBP12.51□□□□□ -0.41
TROAP-211ENST00000549891 RNF112Q9ULX5 631 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 MPDZO75970 2070 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 IQANK1A0A1B0GTG1 560 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 AHRRA9YTQ3 701 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 E7ESA3 106 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 RTCAO00442 366 aaKnown RBP12.5□□□□□ -0.41
TROAP-211ENST00000549891 PCNAP12004 261 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 CD1DP15813 335 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 ENDOUP21128 410 aaKnown RBP12.5□□□□□ -0.41
TROAP-211ENST00000549891 ASCL1P50553 236 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 RAP1GDS1P52306 607 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 SLAMF1Q13291 335 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 E2F2Q14209 437 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 FASTKD3Q14CZ7 662 aaKnown RBP12.5□□□□□ -0.41
TROAP-211ENST00000549891 CEBPEQ15744 281 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 FLYWCH1Q4VC44 716 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 TBCELQ5QJ74 424 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 PRAMEF20Q5VT98 475 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 KHDRBS2Q5VWX1 349 aaKnown RBP12.5□□□□□ -0.41
TROAP-211ENST00000549891 OR4C11Q6IEV9 310 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 CAMKMTQ7Z624 323 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 LAS2Q8IYD9 372 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 ZBED8Q8IZ13 594 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 FAM13CQ8NE31 585 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 FAM222BQ8WU58 562 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 RGMAQ96B86 450 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 JSRP1Q96MG2 331 aaPredicted RBP12.5□□□□□ -0.41
TROAP-211ENST00000549891 ALPK1Q96QP1 1244 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 CD244Q9BZW8 370 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 CAB39LQ9H9S4 337 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 CRIM1Q9NZV1 1036 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 MTRF1LQ9UGC7 380 aaKnown RBP12.5□□□□□ -0.41
TROAP-211ENST00000549891 PHF11Q9UIL8 331 aa12.5□□□□□ -0.41
TROAP-211ENST00000549891 MTO1Q9Y2Z2 717 aaKnown RBP12.5□□□□□ -0.41
TROAP-211ENST00000549891 OR6C76A6NM76 312 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 CAPN14A8MX76 684 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 PHGDHO43175 533 aaKnown RBP12.49□□□□□ -0.41
TROAP-211ENST00000549891 FAM155BO75949 473 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 TGFB1P01137 390 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 FBXO45P0C2W1 286 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 RFPL3SP0C7P2 107 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 ALOX15P16050 662 aaPredicted RBP12.49□□□□□ -0.41
TROAP-211ENST00000549891 BMP5P22003 454 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 BUD31P41223 144 aaPredicted RBP12.49□□□□□ -0.41
TROAP-211ENST00000549891 OR4D1Q15615 310 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 TMEM198Q66K66 360 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 ADGRD1Q6QNK2 874 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 RNF111Q6ZNA4 994 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 MAATS1Q7Z4T9 603 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 GPR180Q86V85 440 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 OR4N5Q8IXE1 308 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 PM20D2Q8IYS1 436 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 ST13P4Q8IZP2 240 aaPredicted RBP12.49□□□□□ -0.41
TROAP-211ENST00000549891 TAGAPQ8N103 731 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 STAG3L4Q8TBR4 150 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 PYROXD1Q8WU10 500 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 EXT2Q93063 718 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 RNASE6Q93091 150 aaKnown RBP12.49□□□□□ -0.41
TROAP-211ENST00000549891 ZNF597Q96LX8 424 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 GAL3ST4Q96RP7 486 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 GPR22Q99680 433 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 CPNE1Q99829 537 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 DOHHQ9BU89 302 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 TRIM31Q9BZY9 425 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 OPTCQ9UBM4 332 aa12.49□□□□□ -0.41
TROAP-211ENST00000549891 ZNF629Q9UEG4 869 aaPredicted RBP12.49□□□□□ -0.41
TROAP-211ENST00000549891 CHCHD2Q9Y6H1 151 aaPredicted RBP12.49□□□□□ -0.41
TROAP-211ENST00000549891 C15orf38-AP3S2A0A0A6YYH1 394 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 ANKRD33BA6NCL7 494 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 A6NNC1 897 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 EFCAB8A8MWE9 144 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 CCDC188H7C350 402 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 SAP18O00422 153 aaKnown RBP12.48□□□□□ -0.41
TROAP-211ENST00000549891 TP53I11O14683 189 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 OR10H2O60403 315 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 SH3BGRLO75368 114 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 EPPINO95925 133 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 IL2RAP01589 272 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 FOSL1P15407 271 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 EPORP19235 508 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 GDF1P27539 372 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 TIMP3P35625 211 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 RPL21P46778 160 aaKnown RBP12.48□□□□□ -0.41
TROAP-211ENST00000549891 DGKQP52824 942 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 ARFIP1P53367 373 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 RAB10P61026 200 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 PHEXP78562 749 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 TNFRSF17Q02223 184 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 PCDH1Q08174 1060 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 CBLBQ13191 982 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 NTRK2Q16620 822 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 SPRED3Q2MJR0 410 aa12.48□□□□□ -0.41
TROAP-211ENST00000549891 FBXL19-AS1Q494R0 122 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms