RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 IDUAP35475 653 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 CXCL12P48061 93 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 CTSCP53634 463 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 CRYBA2P53672 197 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 POLE2P56282 527 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 GPR85P60893 370 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 HSPA14Q0VDF9 509 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 UBAP2LQ14157 1087 aaKnown RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 NFE2L1Q14494 772 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 GANABQ14697 944 aaKnown RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 SEC23BQ15437 767 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 NDUFA9Q16795 377 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 PRICKLE4Q2TBC4 344 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 TEX30Q5JUR7 227 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 PRAMEF14Q5SWL7 426 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 PRAMEF13Q5VWM6 474 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 ZC3H14Q6PJT7 736 aaKnown RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 CIR1Q86X95 450 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 ZZZ3Q8IYH5 903 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 SYTL1Q8IYJ3 562 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF655Q8N720 491 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 ANKRD53Q8N9V6 530 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 POGLUT1Q8NBL1 392 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 CLHC1Q8NHS4 586 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 MAPK15Q8TD08 544 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 NETO1Q8TDF5 533 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 UBLCP1Q8WVY7 318 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 RBM18Q96H35 190 aaKnown RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 C7orf34Q96L11 122 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 ART5Q96L15 291 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 DPH1Q9BZG8 443 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF696Q9H7X3 374 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 CNTD2Q9H8S5 307 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 TNFRSF12AQ9NP84 129 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 ATAD3AQ9NVI7 634 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 CBLCQ9ULV8 474 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 ENTPD4Q9Y227 616 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF208O43345 1280 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 TSPAN2O60636 221 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 GCM2O75603 506 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 AIFM1O95831 613 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 TFPTP0C1Z6 253 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 CCDC166P0CW27 439 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 RAC2P15153 192 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 TUBG1P23258 451 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 GNPDA1P46926 289 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 HIST1H3AP68431 136 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 PRAMEP78395 509 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 TCF15Q12870 199 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 CLCA4Q14CN2 919 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 UGT8Q16880 541 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 SAMD4BQ5PRF9 694 aaKnown RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 ATXN7L2Q5T6C5 722 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 HIST2H3PS2Q5TEC6 136 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 Q6ZPB1 254 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 HIST2H3AQ71DI3 136 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 PTOV1Q86YD1 416 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 NUDCD3Q8IVD9 361 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 OR7G3Q8NG95 312 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 OR10H5Q8NGA6 315 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 MAGEE2Q8TD90 523 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 RGMAQ96B86 450 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 BIRC7Q96CA5 298 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 SIPA1Q96FS4 1042 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 ADNPQ9H2P0 1102 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 CXorf36Q9H7Y0 433 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 SLCO1B3Q9NPD5 702 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 TUBG2Q9NRH3 451 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 AASSQ9UDR5 926 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF223Q9UK11 482 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 EDARQ9UNE0 448 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 RUVBL2Q9Y230 463 aaKnown RBP4.59□□□□□ -1.67
SCAF11-212ENST00000549162 NPFFR2Q9Y5X5 522 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 ACTL7AQ9Y615 435 aa4.59□□□□□ -1.67
SCAF11-212ENST00000549162 MYOFQ9NZM1 2061 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 DVL2O14641 736 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 ITM2AO43736 263 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 IDH3BO43837 385 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 CTNSO60931 367 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 THBDP07204 575 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 MYF5P13349 255 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 NAT1P18440 290 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 SDC1P18827 310 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF10P21506 573 aaPredicted RBP4.59□□□□□ -1.68
SCAF11-212ENST00000549162 HIST1H1TP22492 207 aaPredicted RBP4.59□□□□□ -1.68
SCAF11-212ENST00000549162 DCTDP32321 178 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 ETV3P41162 512 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 ALDH9A1P49189 494 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 ADARB1P78563 741 aaKnown RBP4.59□□□□□ -1.68
SCAF11-212ENST00000549162 MRPL28Q13084 256 aaKnown RBP4.59□□□□□ -1.68
SCAF11-212ENST00000549162 APOFQ13790 326 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 HIST3H3Q16695 136 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 RFX4Q33E94 735 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 LSM12Q3MHD2 195 aaKnown RBP4.59□□□□□ -1.68
SCAF11-212ENST00000549162 KAZNQ674X7 775 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 RPL13AP3Q6NVV1 102 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 ACAD11Q709F0 780 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 EIF3MQ7L2H7 374 aaKnown RBP4.59□□□□□ -1.68
SCAF11-212ENST00000549162 VRK3Q8IV63 474 aa4.59□□□□□ -1.68
SCAF11-212ENST00000549162 CFAP52Q8N1V2 620 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms