RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 PDZK1P1A8MUH7 402 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 PRICKLE3O43900 615 aaPredicted RBP18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 UMPSP11172 480 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 ATP6V1C1P21283 382 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 RPL3P39023 403 aaKnown RBP18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 YBX1P67809 324 aaKnown RBP18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 ABATP80404 500 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 PRDX1Q06830 199 aaKnown RBP18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 TAF11Q15544 211 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 OGFRL1Q5TC84 451 aaPredicted RBP18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 DUS1LQ6P1R4 473 aaKnown RBP18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 PPP1R3BQ86XI6 285 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 LINC01555Q8NAE3 123 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 CATSPER1Q8NEC5 780 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 EGLN2Q96KS0 407 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 PPM1MQ96MI6 270 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 SPNS1Q9H2V7 528 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 IMP3Q9NV31 184 aaKnown RBP18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 AHSPQ9NZD4 102 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 VAPAQ9P0L0 249 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 MAGEL2Q9UJ55 1249 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 RIMS3Q9UJD0 308 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 WBP11Q9Y2W2 641 aaKnown RBP18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 AP4S1Q9Y587 144 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 AKAP9Q99996 3911 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 NF1P21359 2839 aa18.85■□□□□ 0.61
CTDSP2-204ENST00000548823 LILRA5A6NI73 299 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 SCAMP2O15127 329 aaKnown RBP18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 ARPC2O15144 300 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 GPIP06744 558 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 ANXA4P09525 319 aaPredicted RBP18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 ATP6V1B2P21281 511 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 HRH2P25021 359 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 GSTM2P28161 218 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 SEPHS1P49903 392 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 ITGA1P56199 1179 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 KRT33BQ14525 404 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 MTX3Q5HYI7 312 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 ICE2Q659A1 982 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 ADNP2Q6IQ32 1131 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 TMEM132CQ8N3T6 1108 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 LMNTD1Q8N9Z9 388 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 ADCY4Q8NFM4 1077 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.84■□□□□ 0.615e-10■■■■□ 22.9
CTDSP2-204ENST00000548823 NUDT8Q8WV74 236 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 POP5Q969H6 163 aaKnown RBP18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 COQ8BQ96D53 544 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 CCDC115Q96NT0 180 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 PRPF18Q99633 342 aaKnown RBP18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 ZNF184Q99676 751 aaPredicted RBP18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 CCM2LQ9NUG4 571 aaPredicted RBP18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 TBC1D29Q9UFV1 150 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 ATP6V1HQ9UI12 483 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 MCM8Q9UJA3 840 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 GMEB1Q9Y692 573 aa18.84■□□□□ 0.61
CTDSP2-204ENST00000548823 ANKDD1BA6NHY2 528 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 PCDH7O60245 1069 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 SCN2BO60939 215 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 CCNDBP1O95273 360 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 PTPN6P29350 595 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 HPCAL1P37235 193 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 RPS18P62269 152 aaKnown RBP18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 RPS15P62841 145 aaKnown RBP18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 ZNF763Q0D2J5 394 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 VN1R5Q7Z5H4 357 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 MSRB3Q8IXL7 192 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 AVL9Q8NBF6 648 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 FDCSPQ8NFU4 85 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 TTLQ8NG68 377 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 OR52E4Q8NGH9 312 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 OR52E1Q8NGJ3 308 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 OR2A1Q8NGT9 310 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 ZFPM2Q8WW38 1151 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 MTERF3Q96E29 417 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 EBPLQ9BY08 206 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 KLHL4Q9C0H6 718 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 MYNNQ9NPC7 610 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 SLC25A37Q9NYZ2 338 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 BTNL2Q9UIR0 455 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 ICKQ9UPZ9 632 aa18.83■□□□□ 0.61
CTDSP2-204ENST00000548823 KIR2DS5A0A0G2JLQ3 304 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 A0A0G2JNG1 304 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 KIR2DS3K7RE56 304 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 COX7A2P14406 83 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 SHMT2P34897 504 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 GRIA3P42263 894 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 GSTM5P46439 218 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 WNT3P56703 355 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 IL10RAQ13651 578 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 KIR2DS5Q14953 304 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 PGS1Q32NB8 556 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 DEPDC1Q5TB30 811 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 ANXA8L1Q5VT79 327 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 IKBIPQ70UQ0 350 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 COMMD6Q7Z4G1 85 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 CISD2Q8N5K1 135 aaKnown RBP18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 ZNF740Q8NDX6 193 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 SLCO4A1Q96BD0 722 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 ZNF583Q96ND8 569 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 GBP5Q96PP8 586 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms