RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 MYRIPQ8NFW9 859 aa14.67□□□□□ -0.06
DDX54-205ENST00000548786 RBM18Q96H35 190 aaKnown RBP14.67□□□□□ -0.06
DDX54-205ENST00000548786 APOPT1Q96IL0 206 aa14.67□□□□□ -0.06
DDX54-205ENST00000548786 BRF2Q9HAW0 419 aa14.67□□□□□ -0.06
DDX54-205ENST00000548786 TNFRSF12AQ9NP84 129 aa14.67□□□□□ -0.06
DDX54-205ENST00000548786 SLC17A7Q9P2U7 560 aa14.67□□□□□ -0.06
DDX54-205ENST00000548786 VPS29Q9UBQ0 182 aa14.67□□□□□ -0.06
DDX54-205ENST00000548786 COPS7AQ9UBW8 275 aa14.67□□□□□ -0.06
DDX54-205ENST00000548786 PPIEQ9UNP9 301 aaKnown RBP14.67□□□□□ -0.06
DDX54-205ENST00000548786 PTPN13Q12923 2485 aa14.67□□□□□ -0.06
DDX54-205ENST00000548786 TMEM200CA6NKL6 621 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 WISP2O76076 250 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 ESRRBO95718 433 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 ENO1P06733 434 aaKnown RBP14.66□□□□□ -0.06
DDX54-205ENST00000548786 SP1P08047 785 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 MST1P26927 711 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 SERPINB3P29508 390 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 ALDH9A1P49189 494 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 HLCSP50747 726 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 SSR4P51571 173 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 KCNK10P57789 538 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 ERVK-8P63133 956 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 ZNF267Q14586 743 aaPredicted RBP14.66□□□□□ -0.06
DDX54-205ENST00000548786 PCLAFQ15004 111 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 SLC25A25Q6KCM7 469 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 FAM180BQ6P0A1 224 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.66□□□□□ -0.06
DDX54-205ENST00000548786 ZNF227Q86WZ6 799 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 CYP4Z2PQ8N1L4 340 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 RIBC1Q8N443 379 aaPredicted RBP14.66□□□□□ -0.06
DDX54-205ENST00000548786 HORMAD2Q8N7B1 307 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 BANPQ8N9N5 519 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 ST6GALNAC3Q8NDV1 305 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 RDH11Q8TC12 318 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 ZNF721Q8TF20 911 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 SENP5Q96HI0 755 aaPredicted RBP14.66□□□□□ -0.06
DDX54-205ENST00000548786 FAM111AQ96PZ2 611 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 SLX1AQ9BQ83 275 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 MECRQ9BV79 373 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 EBPLQ9BY08 206 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 OXSMQ9NWU1 459 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 LGALS13Q9UHV8 139 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 ERVK-11Q9UQG0 969 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 ERVK-19Q9WJR5 959 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 OSGIN2Q9Y236 505 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 STK38LQ9Y2H1 464 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 FIS1Q9Y3D6 152 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 DOPEY2Q9Y3R5 2298 aa14.66□□□□□ -0.06
DDX54-205ENST00000548786 SYNDIG1LA6NDD5 238 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 DYRK3O43781 588 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 OR6B1O95007 311 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 EDN3P14138 238 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 CREB1P16220 341 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 PIK3R1P27986 724 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 RFC3P40938 356 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 SOX3P41225 446 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 HK2P52789 917 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 RNF4P78317 190 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 CSTF3Q12996 717 aaKnown RBP14.65□□□□□ -0.06
DDX54-205ENST00000548786 INAQ16352 499 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 KRT71Q3SY84 523 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 SPDYAQ5MJ70 313 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 LIPMQ5VYY2 423 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 CLEC6AQ6EIG7 209 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 IL20RBQ6UXL0 311 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 MDGA2Q7Z553 956 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 C9orf40Q8IXQ3 194 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 ST13P4Q8IZP2 240 aaPredicted RBP14.65□□□□□ -0.06
DDX54-205ENST00000548786 TMEM178AQ8NBL3 297 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 CDC26Q8NHZ8 85 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 ASB15Q8WXK1 588 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 NR4A3Q92570 626 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 RIT1Q92963 219 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 TMEM125Q96AQ2 219 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 SCMH1Q96GD3 660 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 APIPQ96GX9 242 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 GAL3ST4Q96RP7 486 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 NMRK1Q9NWW6 199 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 ADAM29Q9UKF5 820 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 PLLPQ9Y342 182 aa14.65□□□□□ -0.06
DDX54-205ENST00000548786 GNG14A0A1W2PPG7 69 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 CCDC151A5D8V7 595 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 G3V3Y1 287 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 PCDH7O60245 1069 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 NME2P1O60361 137 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 ERAL1O75616 437 aaKnown RBP14.64□□□□□ -0.07
DDX54-205ENST00000548786 UNC5CO95185 931 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 CRYABP02511 175 aaKnown RBP14.64□□□□□ -0.07
DDX54-205ENST00000548786 RNF224P0DH78 156 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 NME2P22392 152 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 TRHRP34981 398 aaPredicted RBP14.64□□□□□ -0.07
DDX54-205ENST00000548786 FEN1P39748 380 aaKnown RBP14.64□□□□□ -0.07
DDX54-205ENST00000548786 XKP51811 444 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 TDGF1P3P51864 188 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 DNAJB13P59910 316 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 GPR85P60893 370 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 ZNF844Q08AG5 666 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 ASPHQ12797 758 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 IMPG1Q17R60 797 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 ZNF324BQ6AW86 544 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms