RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 OPN5Q6U736 354 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 GDF7Q7Z4P5 450 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 RELL1Q8IUW5 271 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 TMEM251Q8N6I4 163 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 GOLM1Q8NBJ4 401 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 ACBD4Q8NC06 268 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 NUBPLQ8TB37 319 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 CA5BP1Q8WTZ4 195 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 SGCZQ96LD1 299 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 LURAP1Q96LR2 239 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 UCK2Q9BZX2 261 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 NOL11Q9H8H0 719 aaKnown RBP12.33□□□□□ -0.44
CPSF6-204ENST00000547486 PNPLA3Q9NST1 481 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 TUBA8Q9NY65 449 aaPredicted RBP12.33□□□□□ -0.44
CPSF6-204ENST00000547486 PSD3Q9NYI0 1048 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 TNFRSF10DQ9UBN6 386 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 COPS7AQ9UBW8 275 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 PHF11Q9UIL8 331 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 FOXE1O00358 373 aaPredicted RBP12.32□□□□□ -0.44
CPSF6-204ENST00000547486 PGRMC2O15173 223 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 URI1O94763 535 aaPredicted RBP12.32□□□□□ -0.44
CPSF6-204ENST00000547486 CLPSP04118 112 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 FAM58BPP0C7Q3 252 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 COX7A2P14406 83 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 ALOX15P16050 662 aaPredicted RBP12.32□□□□□ -0.44
CPSF6-204ENST00000547486 TLX1P31314 330 aaPredicted RBP12.32□□□□□ -0.44
CPSF6-204ENST00000547486 PHBP35232 272 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 MAGEA5P43359 124 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 MAGEA12P43365 314 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 ARFIP1P53367 373 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 CKAP4Q07065 602 aaKnown RBP12.32□□□□□ -0.44
CPSF6-204ENST00000547486 PMPCAQ10713 525 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 ZNF267Q14586 743 aaPredicted RBP12.32□□□□□ -0.44
CPSF6-204ENST00000547486 HYAL4Q2M3T9 481 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 NDUFAF5Q5TEU4 345 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 FAM219BQ5XKK7 198 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 KLC3Q6P597 504 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 RGS9BPQ6ZS82 235 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 GK5Q6ZS86 529 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 FAM47EQ6ZV65 393 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 SLC22A16Q86VW1 577 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 ST13P4Q8IZP2 240 aaPredicted RBP12.32□□□□□ -0.44
CPSF6-204ENST00000547486 EID3Q8N140 333 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 PTGR2Q8N8N7 351 aaPredicted RBP12.32□□□□□ -0.44
CPSF6-204ENST00000547486 NOA1Q8NC60 698 aaKnown RBP12.32□□□□□ -0.44
CPSF6-204ENST00000547486 OR52B6Q8NGF0 335 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 OR5M9Q8NGP3 310 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 SLC44A1Q8WWI5 657 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 PHF21BQ96EK2 531 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 FBXL20Q96IG2 436 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 NSUN5Q96P11 429 aaKnown RBP12.32□□□□□ -0.44
CPSF6-204ENST00000547486 SPOCK3Q9BQ16 436 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 FUT8Q9BYC5 575 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 ENKD1Q9H0I2 346 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 TP63Q9H3D4 680 aaPredicted RBP12.32□□□□□ -0.44
CPSF6-204ENST00000547486 IL1RL2Q9HB29 575 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 PROK2Q9HC23 129 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 ZBTB26Q9HCK0 441 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 SACM1LQ9NTJ5 587 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 COQ3Q9NZJ6 369 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 RNF6Q9Y252 685 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 TNPO3Q9Y5L0 923 aaKnown RBP12.32□□□□□ -0.44
CPSF6-204ENST00000547486 OTOGQ6ZRI0 2925 aa12.32□□□□□ -0.44
CPSF6-204ENST00000547486 A0A1B0GTL3 188 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 A0A1B0GVC2 190 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 ATP6AP2A0A1C7CYW4 349 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 ATP6AP2O75787 350 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 CLDN9O95484 217 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 ACSL3O95573 720 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 IGHG3P01860 377 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 P04436 131 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 POU3F2P20265 443 aaPredicted RBP12.31□□□□□ -0.44
CPSF6-204ENST00000547486 ELAVL4P26378 380 aaKnown RBP12.31□□□□□ -0.44
CPSF6-204ENST00000547486 ECHS1P30084 290 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 SLC37A1P57057 533 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 HERVK_113P63132 956 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 ERVK-8P63133 956 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 PLIN5Q00G26 463 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 BIKQ13323 160 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 SLC22A10Q63ZE4 541 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 TMEM211Q6ICI0 200 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 METTL2BQ6P1Q9 378 aaKnown RBP12.31□□□□□ -0.44
CPSF6-204ENST00000547486 PAOXQ6QHF9 649 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 CYP20A1Q6UW02 462 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 RPS27LQ71UM5 84 aaKnown RBP12.31□□□□□ -0.44
CPSF6-204ENST00000547486 TRILQ7L0X0 811 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 CCDC71Q8IV32 467 aaPredicted RBP12.31□□□□□ -0.44
CPSF6-204ENST00000547486 TMEM151AQ8N4L1 468 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 MMGT1Q8N4V1 131 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 C7orf57Q8NEG2 295 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 LILRB4Q8NHJ6 448 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 IFT81Q8WYA0 676 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 RIT1Q92963 219 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 ISL2Q96A47 359 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 REPS1Q96D71 796 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 C16orf45Q96MC5 204 aaPredicted RBP12.31□□□□□ -0.44
CPSF6-204ENST00000547486 CENPKQ9BS16 269 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 CNPPD1Q9BV87 410 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 ERVK-6Q9BXR3 956 aa12.31□□□□□ -0.44
CPSF6-204ENST00000547486 CDC42EP4Q9H3Q1 356 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms