RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 FOLH1Q04609 750 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 CRYZQ08257 329 aaKnown RBP11.54□□□□□ -0.56
COPS7A-221ENST00000546229 LAPTM5Q13571 262 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 SLC10A1Q14973 349 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 NTRK2Q16620 822 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 ACSF3Q4G176 576 aaPredicted RBP11.54□□□□□ -0.56
COPS7A-221ENST00000546229 DEPDC1Q5TB30 811 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 GRHL2Q6ISB3 625 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 ARSKQ6UWY0 536 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 CYS1Q717R9 158 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 ISCA2Q86U28 154 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 ZZZ3Q8IYH5 903 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 ZBED8Q8IZ13 594 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 ZCCHC7Q8N3Z6 543 aaKnown RBP11.54□□□□□ -0.56
COPS7A-221ENST00000546229 SLC15A4Q8N697 577 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 NEIL3Q8TAT5 605 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 PPWD1Q96BP3 646 aaKnown RBP11.54□□□□□ -0.56
COPS7A-221ENST00000546229 SARAFQ96BY9 339 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 GPATCH1Q9BRR8 931 aaKnown RBP11.54□□□□□ -0.56
COPS7A-221ENST00000546229 WWTR1Q9GZV5 400 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 OR51B5Q9H339 312 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 SLC24A3Q9HC58 644 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 ZFP64Q9NPA5 681 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 DMRT3Q9NQL9 472 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 QPCTLQ9NXS2 382 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 DNAJB12Q9NXW2 375 aaKnown RBP11.54□□□□□ -0.56
COPS7A-221ENST00000546229 GRHL1Q9NZI5 618 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 CRIM1Q9NZV1 1036 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 COPS7AQ9UBW8 275 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 RPH3AQ9Y2J0 694 aaPredicted RBP11.54□□□□□ -0.56
COPS7A-221ENST00000546229 ASB4Q9Y574 426 aa11.54□□□□□ -0.56
COPS7A-221ENST00000546229 NINQ8N4C6 2090 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 DOCK7Q96N67 2140 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 A0A0A6YYD5 115 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 SYT5O00445 386 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 TMPRSS11DO60235 418 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 SH3BGRLO75368 114 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 EEDO75530 441 aaKnown RBP11.53□□□□□ -0.56
COPS7A-221ENST00000546229 ZWINTO95229 277 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 LRATO95237 230 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 TGFB1P01137 390 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 GABRA1P14867 456 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 CPN2P22792 545 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 SSR2P43308 183 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 RAB10P61026 200 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 IRF8Q02556 426 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 TGM3Q08188 693 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 ILF2Q12905 390 aaKnown RBP11.53□□□□□ -0.56
COPS7A-221ENST00000546229 PAGE2BQ5JRK9 111 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 WLSQ5T9L3 541 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 CAPN12Q6ZSI9 719 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 CMC1Q7Z7K0 106 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 KRTAP1-3Q8IUG1 177 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 ST13P4Q8IZP2 240 aaPredicted RBP11.53□□□□□ -0.56
COPS7A-221ENST00000546229 CENPLQ8N0S6 344 aaPredicted RBP11.53□□□□□ -0.56
COPS7A-221ENST00000546229 SRFBP1Q8NEF9 429 aaKnown RBP11.53□□□□□ -0.56
COPS7A-221ENST00000546229 TNIP2Q8NFZ5 429 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 OR10Q1Q8NGQ4 319 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 HUS1BQ8NHY5 278 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 DOK4Q8TEW6 326 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 UCN3Q969E3 161 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 RUNDC3BQ96NL0 473 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 CPNE1Q99829 537 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 TRIM31Q9BZY9 425 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 PRDM14Q9GZV8 571 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 RPF2Q9H7B2 306 aaKnown RBP11.53□□□□□ -0.56
COPS7A-221ENST00000546229 NUDT4Q9NZJ9 180 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 B4GALT7Q9UBV7 327 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 CBLCQ9ULV8 474 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 IKBKGQ9Y6K9 419 aa11.53□□□□□ -0.56
COPS7A-221ENST00000546229 ANKRD33BA6NCL7 494 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 A6NNC1 897 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 EFCAB8A8MWE9 144 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 K7EPI3 171 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 UBXN8O00124 270 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 PROM1O43490 865 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 CCNT2O60583 730 aaKnown RBP11.52□□□□□ -0.57
COPS7A-221ENST00000546229 KERAO60938 352 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 FAM155BO75949 473 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 CD99P14209 185 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 ALOX15P16050 662 aaPredicted RBP11.52□□□□□ -0.57
COPS7A-221ENST00000546229 STMN1P16949 149 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 SERPINB1P30740 379 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 BSGP35613 385 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 SOX18P35713 384 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 GP5P40197 560 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 PIK3CBP42338 1070 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 ZNF136P52737 540 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 ARFIP1P53367 373 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 HERVK_113P63132 956 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 ERVK-8P63133 956 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 MRPS25P82663 173 aaKnown RBP11.52□□□□□ -0.57
COPS7A-221ENST00000546229 PLIN5Q00G26 463 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 FOXD4Q12950 439 aaPredicted RBP11.52□□□□□ -0.57
COPS7A-221ENST00000546229 DCST1Q5T197 706 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 SLC22A10Q63ZE4 541 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 BICRALQ6AI39 1079 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 OR4C11Q6IEV9 310 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 MED27Q6P2C8 311 aa11.52□□□□□ -0.57
COPS7A-221ENST00000546229 WDR53Q7Z5U6 358 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms