RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 SPDYAQ5MJ70 313 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 NOXRED1Q6NXP6 359 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 Q6ZS92 163 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 PTRH1Q86Y79 214 aaKnown RBP17.83■□□□□ 0.44
DDX55-211ENST00000544429 ZNF781Q8N8C0 355 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 PPP1R14CQ8TAE6 165 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 RAB3IL1Q8TBN0 382 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 C16orf78Q8WTQ4 265 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 DAZLQ92904 295 aaKnown RBP17.83■□□□□ 0.44
DDX55-211ENST00000544429 VMP1Q96GC9 406 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 C3orf30Q96M34 536 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 CCT7Q99832 543 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 KCNK13Q9HB14 408 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 ANAPC2Q9UJX6 822 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 DLGAP4Q9Y2H0 992 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 WBP11Q9Y2W2 641 aaKnown RBP17.83■□□□□ 0.44
DDX55-211ENST00000544429 CLCA3PQ9Y6N3 262 aa17.83■□□□□ 0.44
DDX55-211ENST00000544429 C17orf105B2RV13 164 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 IFNA16P05015 189 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 IL3P08700 152 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 ANXA4P09525 319 aaPredicted RBP17.82■□□□□ 0.44
DDX55-211ENST00000544429 PLIN5Q00G26 463 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 ZNF763Q0D2J5 394 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 STX3Q13277 289 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 NADK2Q4G0N4 442 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 RFTN2Q52LD8 501 aaPredicted RBP17.82■□□□□ 0.44
DDX55-211ENST00000544429 ACER2Q5QJU3 275 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 CRLF3Q8IUI8 442 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 OR4K14Q8NGD5 310 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 OR1N1Q8NGS0 311 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 AGR3Q8TD06 166 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 ZNF721Q8TF20 911 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 TM9SF4Q92544 642 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 HAS2Q92819 552 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 NCLNQ969V3 563 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 ZNF681Q96N22 645 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 DGAT2Q96PD7 388 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 PELOQ9BRX2 385 aaKnown RBP17.82■□□□□ 0.44
DDX55-211ENST00000544429 FAIM2Q9BWQ8 316 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 EBPLQ9BY08 206 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 LRTM1Q9HBL6 345 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 MYNNQ9NPC7 610 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 NKIRAS1Q9NYS0 192 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 EXO1Q9UQ84 846 aaKnown RBP17.82■□□□□ 0.44
DDX55-211ENST00000544429 CSAG2Q9Y5P2 127 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 ZNF462Q96JM2 2506 aa17.82■□□□□ 0.44
DDX55-211ENST00000544429 GNG14A0A1W2PPG7 69 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 TMEM200CA6NKL6 621 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 EIF4E1BA6NMX2 242 aaKnown RBP17.81■□□□□ 0.44
DDX55-211ENST00000544429 HMGB1P1B2RPK0 211 aaPredicted RBP17.81■□□□□ 0.44
DDX55-211ENST00000544429 CDK2AP1O14519 115 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 MAN1A2O60476 641 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 SEC22BO75396 215 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 SORBS2O94875 1100 aaKnown RBP17.81■□□□□ 0.44
DDX55-211ENST00000544429 JUNP05412 331 aaKnown RBP17.81■□□□□ 0.44
DDX55-211ENST00000544429 PIK3R1P27986 724 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 CLCN2P51788 898 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 CEBPEQ15744 281 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 SLC6A19Q695T7 634 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 FAM71E1Q6IPT2 247 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 LINC00696Q6ZRV3 163 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 Q8NA96 180 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 SLC2A12Q8TD20 617 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 MGARPQ8TDB4 240 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 PPWD1Q96BP3 646 aaKnown RBP17.81■□□□□ 0.44
DDX55-211ENST00000544429 CNRIP1Q96F85 164 aaPredicted RBP17.81■□□□□ 0.44
DDX55-211ENST00000544429 RBM18Q96H35 190 aaKnown RBP17.81■□□□□ 0.44
DDX55-211ENST00000544429 FBXL20Q96IG2 436 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 ZNF354BQ96LW1 612 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 PAIP2Q9BPZ3 127 aaKnown RBP17.81■□□□□ 0.44
DDX55-211ENST00000544429 ILKAPQ9H0C8 392 aaPredicted RBP17.81■□□□□ 0.44
DDX55-211ENST00000544429 EPS8L2Q9H6S3 715 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 TAS2R7Q9NYW3 318 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 EHD3Q9NZN3 535 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 TEKT2Q9UIF3 430 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 TMED5Q9Y3A6 229 aa17.81■□□□□ 0.44
DDX55-211ENST00000544429 KLF11O14901 512 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 ATP1B1P05026 303 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 CPMP14384 443 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 COX7A2P14406 83 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 TACR1P25103 407 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 SOX18P35713 384 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 CASRP41180 1078 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 RPL14P50914 215 aaKnown RBP17.8■□□□□ 0.44
DDX55-211ENST00000544429 XKP51811 444 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 C19orf57Q0VDD7 668 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 HEPACAMQ14CZ8 416 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 NR6A1Q15406 480 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 IKBIPQ70UQ0 350 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 DDIASQ8IXT1 998 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 KIRREL3Q8IZU9 778 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 ZADH2Q8N4Q0 377 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 SLC5A8Q8N695 610 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 ZNF321PQ8N8H1 164 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 TEX19Q8NA77 164 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 OR8K3Q8NH51 312 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 PNPLA2Q96AD5 504 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 CXorf21Q9HAI6 301 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 STMN3Q9NZ72 180 aa17.8■□□□□ 0.44
DDX55-211ENST00000544429 B3GNT3Q9Y2A9 372 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms